Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00879 ATGGGAAAATCATGTGGCTTTTTCTTCTTGCTCCTCCTTCTTGTCTTTGCTTCTCAGGTAGTGGTGCAGACGGAGGGACGAGTGTGCGAGTCACAGAGCCACGGCTTCCATGGTGCATGCACTGGAGACCATAACTGTGCTCTGGTATGCAGGAACGAAGGTTTCTCCGGTGGCAAGTGCAAAGGCTTCCGCCGACGATGCTTCTGCACTAAGCTTTGCTGA 222 0.527 MGKSCGFFFLLLLLVFASQVVVQTEGRVCESQSHGFHGACTGDHNCALVCRNEGFSGGKCKGFRRRCFCTKLC* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00879 73 SUPERFAMILY Scorpion toxin-like 27 73 IPR036574 -
Lapu9g00879 73 PANTHER DEFENSIN-LIKE PROTEIN 1 3 73 - -
Lapu9g00879 73 Pfam Gamma-thionin family 27 73 - -
Lapu9g00879 73 Gene3D - 27 73 IPR036574 -
Lapu9g00879 73 SMART gth_4 28 73 IPR003614 GO:0006952
Lapu9g00879 73 ProSitePatterns Gamma-thionins family signature. 27 50 IPR008176 GO:0006952
Lapu9g00879 73 PRINTS Purothionin signature 28 43 IPR008176 GO:0006952
Lapu9g00879 73 PRINTS Purothionin signature 58 72 IPR008176 GO:0006952
Lapu9g00879 73 CDD Knot1 38 70 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00879 Lapu-Chr9 13158409 13158730 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00879 9 73 Plant Defensins Gene Families AT5G63660 63.077 3.48e-27 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00879 - - gmx:547938 129.798