Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00858 ATGGAAGATGCAAGTGTCAACCTTCCTCCTGGGTTTTTCTTCTCTCCAACTGATGAAGAACTTGTTCTTCACTTTCTCTATTGCAAGGCTTCTCTTATTCCATGCCACCCCAACATCATCCCCGACCTCGATTTCTCTCAGCTTCATCCTTGGGAACTAAATGGTAAGGCGTTGTTAAGTGGGAATCAGTACTATTTCTTCACCAAAGTGAAAGAAAACAGAACAACGGAAAATGGGTGTTGGAAGGAAATAGGTGTCACGGAATCTATATTTTCAACTTTTGACAAGAAAGTGGGAACGAAGAAGTACTTGGTATTCCACATTGGTGGTACTGAAACCAATTGGGTAATGCAAGAATATCATATATGTTCCTCTGGGTTTGACACTGCGTCCTATAGAAGTGCCAGGAGAAGAAGAAAACATGATCAAAGTTGGAACAAGTGGGTTTTGTGCAGAGTGTACGAAAAGATGAGGTCTCATCAAGGTGAAAACTGCTATAGCGATGACGATGAGAGTGGATCAGAGCTTTCATGGCTAGATGAAGTTTATCTGTCCTTGGATGATGATCTGGAAGAAATTGGCATGCCTAATTAG 594 0.4158 MEDASVNLPPGFFFSPTDEELVLHFLYCKASLIPCHPNIIPDLDFSQLHPWELNGKALLSGNQYYFFTKVKENRTTENGCWKEIGVTESIFSTFDKKVGTKKYLVFHIGGTETNWVMQEYHICSSGFDTASYRSARRRRKHDQSWNKWVLCRVYEKMRSHQGENCYSDDDESGSELSWLDEVYLSLDDDLEEIGMPN* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00858 197 ProSiteProfiles NAC domain profile. 8 156 IPR003441 GO:0003677|GO:0006355
Lapu9g00858 197 SUPERFAMILY NAC domain 5 155 IPR036093 GO:0003677|GO:0006355
Lapu9g00858 197 Gene3D NAC domain 17 160 IPR036093 GO:0003677|GO:0006355
Lapu9g00858 197 PANTHER NAC TRANSCRIPTION FACTOR 56 8 163 - -
Lapu9g00858 197 Pfam No apical meristem (NAM) protein 9 122 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00858 Lapu-Chr9 12825412 12826404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00858 1 161 NAC Transcription Factor Family AT1G61110 38.547 1.81e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu9g00858 NAM 4.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00858 - - gmx:100170711 368.237