Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00857 ATGAAGAAACAAGGGTGTGAGGTTGAGGCAACAGACATCAACTACAAGATCCGTACAAAGGCAACAGAGCAACCTTCTAAAATCTTCAGCAAAATTCCACAATTGAATGGGGAAGAAGATGGTTGTCAAGCAGAAGATGAAGCAAAAGCTGAACAAAGATCATGCAGTGGAGTTAGGCATGTCCTCAAGAATGTGAATTGCATAGCAAAGCCATGGGAAATTCTGGCAATTGTTGGGCCAAGTGGGGCTGGGAAATCATCCCTTCTTAAGATCCTAGCTGGTAAAGCTAGTTCACAAAGTGGGTGTATCTTGGTGAATCAAGAACCTATGGATAAAGCTCAGTTCAAAAAAATTTCAGGGTATGTTACACAAAAGGATACCTTGTTTCCATTACTTACGGTTGAAGAAACCATAATGTTTAGTGCAAAGCTAAGGTTAAGTCTTCCTCGAGAACAACTATGCTCCAGGGTCAAGTCACTGATTCTAGAGCTTGGTCTTAGCCATGTTGCTAGGACTAGAATTGGAGATGACCGGGTCCGTGGCATATCTGATGGTGAGAGGCGCCGAGTTTCCATTGGTGTTGAAGTCATACATGATCCAAAAGTACTGATTTTGGATGAACCAACTTCAGGGCTTGACAGTACCTCAGCTTTGCAAATAATTGATATGCTTAAAGTCATGGCTGAATCTAGGGGGCGAACTATAATCCTAACTATCCACCAACCCGGGTACAGAATAGTGAAGTTGTTTAACTCAATACTCTTATTGGCTGGTGGTATTGTCTTGCACCATGGCACCGTGGATTTGCTGGGTGTAAATCTAAGGCTAATGGGTTTAGAGCTTCCTCTTCACGTTAATGTGGTTGAGTTTGCAATTGATTCTATTGAGATAATTCAGCAACATAAAAAATGTCAGCGGGTTCAGCTAGAAGAGCCTAGGCCATTACCAAGGAAATGTGGTGATCAAGCTGGGAGTAGAAGTGGTGAGTTTACTTTGCAACAGCTCTTTCAACAATCCAAGGTAATTGATATAGAAATCATTAGCGCGGGAACGGATGTCAGTTGTGATTTTGCTAATTCTGGATTGAGAGAAACTATGATTTTAACTCATAGATTCTCCAAAAACATCCTACGTACAAAGGAACTCTTTGCAAGCAGGACAATACAAATGCTGGTTTCTGGACTGGTTTTGGGCTCAGTCTTTTGTAATCTCAAGGATGGTCTAGTGGGAGCAGAAGAACGAGTGGGTCTATTTGCTTTCGTTTTAACGTTTATGTTATCAAGCACCACCGAAGCTCTACCAATTTTTCTGCAAGAAAGGGATATTCTAATAAAAGAAACCTCTAGTGGAAGCTACAGAGTTTCATCCTATGCTATCGCCAATGGCCTAGTTTACTTGCCCTTTTTGCTCATACTGGCCATTTTATTCACAGTGCCTTTGTACTGGCTTATTGGCCTCAACAGGAATTTTTCGGCATTTTTGTACTTTTTGATGATAGTTTGGCTAATTCTTTACACTGCAAACTCGGTTGTGGTATGCTTCAGTGCTCTGGTGCCTAATTTCATTGTTGGGAATTCAATGATCACTGGTGTCATCGGTTCGTTTCTTCTGTTCTCAGGCTACTTCATATCAAAACATGAAATTCCAAGTTACTGGATTTTCATGCATTATATATCTCCATTTAAGTATCCCTTTGAAGGGTTTCTGATAAACGAGTTCTCCAACTCAAAAAAGTGCTTGGAGTACTTGTTTGGGGCATGTGTGGTGAGAGGAGAGGATTTACTTAAAGAAGCAGAGCTTGGAGGGGAGACAAGTAGATGGAAGAATGTTGGGGTAATGTTATGTTTCATCCTGGTTTCCAGGTTCATTTCTTTTGCAATTCTTAGGTACAAATGCTCACAAGGAGTCATCCTAAAAGTATGA 1923 0.4098 MKKQGCEVEATDINYKIRTKATEQPSKIFSKIPQLNGEEDGCQAEDEAKAEQRSCSGVRHVLKNVNCIAKPWEILAIVGPSGAGKSSLLKILAGKASSQSGCILVNQEPMDKAQFKKISGYVTQKDTLFPLLTVEETIMFSAKLRLSLPREQLCSRVKSLILELGLSHVARTRIGDDRVRGISDGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMAESRGRTIILTIHQPGYRIVKLFNSILLLAGGIVLHHGTVDLLGVNLRLMGLELPLHVNVVEFAIDSIEIIQQHKKCQRVQLEEPRPLPRKCGDQAGSRSGEFTLQQLFQQSKVIDIEIISAGTDVSCDFANSGLRETMILTHRFSKNILRTKELFASRTIQMLVSGLVLGSVFCNLKDGLVGAEERVGLFAFVLTFMLSSTTEALPIFLQERDILIKETSSGSYRVSSYAIANGLVYLPFLLILAILFTVPLYWLIGLNRNFSAFLYFLMIVWLILYTANSVVVCFSALVPNFIVGNSMITGVIGSFLLFSGYFISKHEIPSYWIFMHYISPFKYPFEGFLINEFSNSKKCLEYLFGACVVRGEDLLKEAELGGETSRWKNVGVMLCFILVSRFISFAILRYKCSQGVILKV* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00857 640 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 6 621 - -
Lapu9g00857 640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 269 IPR027417 -
Lapu9g00857 640 Pfam ABC transporter 62 210 IPR003439 GO:0005524
Lapu9g00857 640 FunFam ABC transporter G family member 5 47 307 - -
Lapu9g00857 640 Pfam ABC-2 type transporter 240 310 IPR043926 GO:0140359
Lapu9g00857 640 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 283 IPR003439 GO:0005524
Lapu9g00857 640 SMART AAA_5 71 268 IPR003593 GO:0016887
Lapu9g00857 640 Pfam ABC-2 type transporter 365 573 IPR013525 GO:0016020|GO:0140359
Lapu9g00857 640 Gene3D - 49 301 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00857 Lapu-Chr9 12812357 12814279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00857 60 288 Calmodulin-binding Proteins AT2G36910 23.950 1.93e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00857 K05681 - gmx:121172640 1068.53