Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00845 ATGGATGCCCCAACCCTCCTCTTACCCCACCCTGATCTCTATTTCCAAACTCCCGCTGGCAACCGCATTCCAGCGCACGCTACCATTCTGGATGCGTGCAGGTGCACGGAGGAGGATATGGACAAGTACGGAATGCACCTTCTGGCACTATCGCACGTGTACACGGTGAAGCAGCTGAAGCAGCGGTGCATCAAGGGACTGGGCGAGCGCGTGAGTACGGAGAACGTAGTGGATGTGTTGCAACTGGCGCGGCTCTGCGATGCACCGGATCTCTACCTCAAGTGCGTCAAGCACCTCACGAACTATTTCAAAGAGGTGAAGGAAACCGAGGGATGGAGATTCTTGCAGAACCACGATCCCTGCCTCGAACTTGAGATTCTCCGTTTAATGGAAGAACATGAAATGGGGTGCACGGAGGTAAGGCCGTACGATGTGGAGGTTGGGCGAGGGAGAGAACCGTGCTCAAAGTTCGGCACGTGTCAGGGTCTGCAGATTTTGATTCGACACTTCGCAACCTGCGAGAGGGTTAAGGGACGGTGTTTGCGGTGTAAGCGCATGTGGCAACTCTTTAGACTCCATTCCTCCATTTGCCTGCTACACGATTCTTGCAAGGTTCCTCTGTGCAGGCAAATTAGATTAAAAATGGAGGAAGAGAACAATAAAGGAGACGCAAGGTGGCAAGTACTGGTGAGGAAGGTGGCCTCGGCCAAAGCCATGTCTTCCTTGGCACTGCCAAAGAGGAAGCGGGTTGAGGAAACTGGAGCAGAGGGACCATAG 777 0.5367 MDAPTLLLPHPDLYFQTPAGNRIPAHATILDACRCTEEDMDKYGMHLLALSHVYTVKQLKQRCIKGLGERVSTENVVDVLQLARLCDAPDLYLKCVKHLTNYFKEVKETEGWRFLQNHDPCLELEILRLMEEHEMGCTEVRPYDVEVGRGREPCSKFGTCQGLQILIRHFATCERVKGRCLRCKRMWQLFRLHSSICLLHDSCKVPLCRQIRLKMEEENNKGDARWQVLVRKVASAKAMSSLALPKRKRVEETGAEGP* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00845 258 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 33 134 IPR044513 -
Lapu9g00845 258 Gene3D Potassium Channel Kv1.1; Chain A 33 111 IPR011333 -
Lapu9g00845 258 Pfam TAZ zinc finger 132 208 IPR000197 -
Lapu9g00845 258 SUPERFAMILY TAZ domain 132 216 IPR035898 -
Lapu9g00845 258 FunFam BTB/POZ and TAZ domain-containing protein 2 72 141 - -
Lapu9g00845 258 CDD BACK 72 115 - -
Lapu9g00845 258 Gene3D TAZ domain 122 236 IPR035898 -
Lapu9g00845 258 SMART TAZ_2 120 209 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00845 Lapu-Chr9 12607232 12611578 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Lapu9g00845 zf-TAZ 9.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00845 - - pvu:PHAVU_009G170600g 425.246