Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00816 ATGGCTCTAAATCTACAACCATCGTGCATGAAGCAAGTGGCACAGGACCCAAATGCTACCCTTTTCATGTTGTTTTCCTTCGTCATCAGCATGTTCCTGGTGTTTAAGCTCACAAGAAAAACCAAACACAATCTACCTCCATCCCCTCCAAAACTACCTATAATCGGAAACTACCACCAGTTAGGAACACTTCCCCATCGCTCTTTCCAAACCCTCTCAAAGAAACTCGGTCCTCTATTGTTGTTGAAGCTGGGTCAGCTACCCGTTTTGGTGGTTAACTCGGTAGGTTTAGCCAGAGAGGTTTTCCAAACCCATGACGAGGTTTTCGCTGGTAGGCCACATCTCACGGCCTCGAGAATCTTGCTCTACGGGTGCAAAGACGTTGGATATTCATCCTACGGTGACGAATGGAGACAGAAAAGGAAACTCTGCGTGGTTGAATTGCTGAGCATGAAAAAGGTTAAATCGGTTCAGTTCATAAGAGAAGAGGAAGTGGAGGCACTGGTTAGTGACATACGTAAAGCATGCACAAGCAATGGCTCTTCTGTGAACCTCAGCGAGATGCTAGTTATGACCGCAAACAACATAGTGTGTAGGTGCGTATTAGGAAGGAAATATGATGCTGAAGATGGAAATTACAGATTTGGTGAACTTGCGAGGGAAGCGATGACTCAAATTTCAGATTTCAGTTTGGGAGACGTATTCCCATTCTTGGGTTGGGTTGGCGTTCTGAGTGGCCAAACTAAAAAGTATAAGGCCACTTTTGAAGCTTTGAATGCTTTCTTTGATCATCTAATTGAAGAGCATAAGATGGCAAGGGTGGATCCTGGGAACAAAGACTTCCTTCACAGTCTCCTTGAACTTCAAGATAGTGATAGGCAAGAGTTCGAGCTCACAACAGATGACCTAAAAGCTCTTGTCATGGACATGTTTTTGGGAGGAAGTGACACAACTTCAACAACACTAGAATGGGCTGTGTCGGAACTTGTAAGAAATCCAGGCACAATGAAGAAAGTGCAGGAGGAGGTAAGAAGAGTTGCGAGGGATAAGTCGAAAATAGAAGACAGTGATATCGATCAAATGGACTACTTAAAATGTGTAATCAAAGAGACTCTCAGGTTACACCCACCTGGTTCACTTTTGGTCCCTAGAGAAACAACAACCAATGTGAAACTTGGAGAATACGATATTCCTGAGAAAACAATGGTGTTTATCAACGCATGGGCGATTCAGAGGGACCCTGAATTTTGGGAGAAGCCTGAAGAATTTTTACCAGAGAGATTTGAAAATGGTGAGGTTAATTTCAATGGTCAAGACTTTCAGTTTATCCCATTCGGTTCTGGGAAGAGAAAATGCCCTGGTATGGCATTTGGGCTGGCTACAGTGGAATATGTGCTTGCTAATCTTTTGTGTCACTTCGATTGGAAGCTTTCTAAAAGTGGTGAGTCTGATTCAGACCTTGACATGACTGAAAAATATGGCCTCACTACCACTAGGAAAGAACCTCTCCATCTCCAACCAATACTGAATTCCAATTTCTGA 1542 0.4345 MALNLQPSCMKQVAQDPNATLFMLFSFVISMFLVFKLTRKTKHNLPPSPPKLPIIGNYHQLGTLPHRSFQTLSKKLGPLLLLKLGQLPVLVVNSVGLAREVFQTHDEVFAGRPHLTASRILLYGCKDVGYSSYGDEWRQKRKLCVVELLSMKKVKSVQFIREEEVEALVSDIRKACTSNGSSVNLSEMLVMTANNIVCRCVLGRKYDAEDGNYRFGELAREAMTQISDFSLGDVFPFLGWVGVLSGQTKKYKATFEALNAFFDHLIEEHKMARVDPGNKDFLHSLLELQDSDRQEFELTTDDLKALVMDMFLGGSDTTSTTLEWAVSELVRNPGTMKKVQEEVRRVARDKSKIEDSDIDQMDYLKCVIKETLRLHPPGSLLVPRETTTNVKLGEYDIPEKTMVFINAWAIQRDPEFWEKPEEFLPERFENGEVNFNGQDFQFIPFGSGKRKCPGMAFGLATVEYVLANLLCHFDWKLSKSGESDSDLDMTEKYGLTTTRKEPLHLQPILNSNF* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00816 513 Coils Coil 336 356 - -
Lapu9g00816 513 CDD CYP71-like 89 503 - -
Lapu9g00816 513 PANTHER CYTOCHROME P450 71B11-RELATED 31 508 - -
Lapu9g00816 513 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g00816 513 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g00816 513 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g00816 513 SUPERFAMILY Cytochrome P450 46 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g00816 513 FunFam Cytochrome P450 83B1 33 506 - -
Lapu9g00816 513 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g00816 513 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g00816 513 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g00816 513 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g00816 513 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g00816 513 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g00816 513 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g00816 513 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g00816 513 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g00816 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Lapu9g00816 513 Gene3D Cytochrome P450 32 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g00816 513 Pfam Cytochrome P450 46 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00816 Lapu-Chr9 11819140 11820870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00816 36 504 Cytochrome P450 AT3G48270 44.186 1.14e-137 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00816 K20617 - cave:132176196 582.793