Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00798 ATGGAATCCAAACCCGGTCAAAATATCAAGCTCCTCTGTAGCTACGGCGGCAAAATACGCCCACGCGCCACCGACGGCGAACTCCGTTACGTAGGCGGTCACACCAGAGTACTCACTGTCCACCGTTCGATCTCCTTTTCAGAATTGATGGTGAAACTTAGCGAGTTTTGTGGTTTGTCTGTGATCTTGAGGTGTCAATTGCCCAAGGGAGACTTGGAGACCTTGATTTCCATCACCAACGACGAAGATCTCGCTAACATAATCGAAGAATACGATCGTGCCTCGTTAAAATTGGCGCATCCGATGAAGATCAGAGCCGTTCTCTTGCCGCCGAAATCGGCGAAGAAGGTTTCGTCTGCTCCGTCGTTGTCCTCGGCATCATCCAGCGCCAGTCACTCCCCGTCCAGATCTCCTCACACATCCGCCGAATCCCTGCCGTACCGCCACGGCTGCAATTACCGGACACCGCCGGCGCCGGCTGCGTACGCTATCAGCGTGCGTAACGGCTCGGCGAAGGCCTGTTGCTACACGCAGTTCGATGGAAGCCCTAGGTTTTGGCGTCGTGGACCTCACTGCTATAATTACTGTCACTGA 594 0.5438 MESKPGQNIKLLCSYGGKIRPRATDGELRYVGGHTRVLTVHRSISFSELMVKLSEFCGLSVILRCQLPKGDLETLISITNDEDLANIIEEYDRASLKLAHPMKIRAVLLPPKSAKKVSSAPSLSSASSSASHSPSRSPHTSAESLPYRHGCNYRTPPAPAAYAISVRNGSAKACCYTQFDGSPRFWRRGPHCYNYCH* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00798 197 SMART PB1_new 23 111 IPR000270 GO:0005515
Lapu9g00798 197 Pfam PB1 domain 27 97 IPR000270 GO:0005515
Lapu9g00798 197 Gene3D - 29 108 - -
Lapu9g00798 197 MobiDBLite consensus disorder prediction 119 142 - -
Lapu9g00798 197 PANTHER OS05G0427100 PROTEIN-RELATED 5 137 - -
Lapu9g00798 197 SUPERFAMILY CAD & PB1 domains 25 117 - -
Lapu9g00798 197 MobiDBLite consensus disorder prediction 119 144 - -
Lapu9g00798 197 CDD PB1_UP2 12 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00798 Lapu-Chr9 11409225 11412610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00798 9 93 MAP Kinase Kinase Kinase AT5G57610 48.235 5.75e-25 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00798 - - vra:106761207 334.339