Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00790 ATGGCATCATCCAGCTCCTACAATTCTCCATGTGCTGCCTGCAAATTCTTGAGGAGGAAATGCCTTTCAGGGTGCATCTTTGCACCTTACTTCCCACCAGAAGAGCCTCAAAAGTTCGCCAACGTGCACAAGATATTCGGTGCTAGCAATGTGACGAAGCTTCTGAACGAGCTTCTCCCTCACCAGAGGGAAGATGCAGTGAACTCCCTTGCCTACGAAGCTGAGGCACGTGTGAGGGACCCCGTTTATGGCTGCGTAGGGGCCATCTCTTTCCTGCAGAGACAAGTTCAAAGGCTCCAAAAGGAGCTTGATTCTGCCAATGCTGATCTCCTTCGCTATGCCTACAATGACATGCCTCCACCCTCTCTTTCTGTGCCCCCAGCAATTACAGCAACAACAATTCCACAAATGCCCCAAAGGCCTTTCAGTGCAAGGTTTGGAAACGAAGCAAGTGGGTTTTATAGGCCCTCTCCGACCACCACTTATAACTCATTCCCTTATTCTCTTCCATGGACTGATACCCCTCCCGAGGATATCAATGATGGAGGAGGAGAAGGAGGAGGTAACTTGTGA 573 0.5009 MASSSSYNSPCAACKFLRRKCLSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDSANADLLRYAYNDMPPPSLSVPPAITATTIPQMPQRPFSARFGNEASGFYRPSPTTTYNSFPYSLPWTDTPPEDINDGGGEGGGNL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00790 190 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Lapu9g00790 190 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Lapu9g00790 190 Coils Coil 89 116 - -
Lapu9g00790 190 MobiDBLite consensus disorder prediction 167 190 - -
Lapu9g00790 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00790 Lapu-Chr9 11091187 11091759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00790 1 190 AS2 family AT5G63090 62.887 8.38e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu9g00790 LOB 9.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00790 - - gmx:100799774 314.309