Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00763 ATGGTTATGGGTATGGGTATCAATATAAAGGGAGAAATAGAGAGGGTAAATGGGAAGGAACTGAGATACAGTGAATTCGTGGAGAGATATATGGAGAAGAACAAGCCCGTGGTGCTCACTGGGCTAATGGACCCTCATCATTGGAGAGCCTGCACTGATTGGGTCACACTTCATTCCCTACCCAACTTTCAGTTTTTCTCCACTCATTTTGGAGCTTCTAAAGTTCAGGTTGCTGATTGTGGCACCAGAGAATTTACTGATCAGAAAGGAGAGGAGATGTTGGTCTCCGATTTTATAGAGCGTTGCCTTCATCCTGAGGAGGCTCCTGCTGTTCGGTGTAATAATGAAAATTGTGCAAGTAATGGTGCCTCTGTATCTGTACCGTATTTGAAGGATTGGCATTTTGTAAAGGAGTATCCTGAATATGTAGCATATGACACTCCAAGGTTCTTTTGTGATGACTGGCTCAATCTGTATCTTGACAACTTCAGAATCCATATTGATTCTGACACACAACAACCAAATGAGGAAGTTTGTTGCTCTGACTATCGATTTGTTTACATTGGGGTGAAAGGATCTTGGACTCCTCTTCATGCTGATGTTTTCAGGTCCTATAGCTGGTCATCAAATGTCTGTGGAAAGAAGAGATGGCTTTTTCTAGATCCTTCCCAGTGTCATCTTATATTTGACAGGAATATGAAAAATTGTGTATATAATATCTTTGATGAAGTATCAAACTCAAAGTTTCCTGGTTTTAGCAAGGCTATCTGGTTAGAATGCACACAAGAAGCAGGTGAAATTATATTTGTTCCCAGCGGATGGTATCATCAAGTTCATAATTTGGAGGATACAATATCTATAAACCACAATTGGTTCAACGCTTATAACCTTTCTTGGGTGTGGAATTTACTTTTAAGGGACTATAACGAGGCCAAGGAATACATAGAAGACATCAAGGATATATGTGATGATTTTGAAGGTCTATGCCAGCGCAATCTTGCTGCTAACACAGGGATGAATTTTTATGACTTCTTTACTTTCCTGTCATACTTCACCTTGGCCAACTTGGTGCTGCTTCGTTATATAAATAGAAGATATGGAAGGGCTACCGGAAGTTCATCAACAATAGCTCAGCATTTATTCATGAATCTTGGGTGTTTAAGGAAGATTGCTTCAGAGATGAAACACATACGTGCTCTAGAAGGAAATCATAATTGCGTTGTGGATATTATCAAAGCATTTGAAGATCCTAGATTTTCCAAATTATGCATGCATGTAGGAAGAACATATGTCATGGTACATGAGCAATCCTACTTGGCCTCTGATTTCGAGTGCACTTCAATGAGTGATTTGGTAGACTACAATGATTCGAAATCATACGTATCTCTGATCTACACACCTGAAGATCTCATTAAATTTATAGACAATGGTGTTGCAGAAGAGGAGTCATCTGCACATCGTCTACTGCAGTTTTACAATTGTCAACTCATTGCTTCTACTCTCTTGAGACGAGAAAGTTATCACCCAACTGGCACTTGTCATAGCTTTTGTTGTGAAAAATTAGGGAGAGGAGTTGGTTCCTTAGCCCAAAGCTGGAAAAAGGAAAGTCTTTTAGACTAG 1620 0.3957 MVMGMGINIKGEIERVNGKELRYSEFVERYMEKNKPVVLTGLMDPHHWRACTDWVTLHSLPNFQFFSTHFGASKVQVADCGTREFTDQKGEEMLVSDFIERCLHPEEAPAVRCNNENCASNGASVSVPYLKDWHFVKEYPEYVAYDTPRFFCDDWLNLYLDNFRIHIDSDTQQPNEEVCCSDYRFVYIGVKGSWTPLHADVFRSYSWSSNVCGKKRWLFLDPSQCHLIFDRNMKNCVYNIFDEVSNSKFPGFSKAIWLECTQEAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWNLLLRDYNEAKEYIEDIKDICDDFEGLCQRNLAANTGMNFYDFFTFLSYFTLANLVLLRYINRRYGRATGSSSTIAQHLFMNLGCLRKIASEMKHIRALEGNHNCVVDIIKAFEDPRFSKLCMHVGRTYVMVHEQSYLASDFECTSMSDLVDYNDSKSYVSLIYTPEDLIKFIDNGVAEEESSAHRLLQFYNCQLIASTLLRRESYHPTGTCHSFCCEKLGRGVGSLAQSWKKESLLD* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00763 539 SMART cupin_9 128 308 IPR003347 -
Lapu9g00763 539 Pfam Cupin-like domain 25 291 IPR041667 -
Lapu9g00763 539 ProSiteProfiles JmjC domain profile. 136 308 IPR003347 -
Lapu9g00763 539 SUPERFAMILY Clavaminate synthase-like 9 320 - -
Lapu9g00763 539 Gene3D Cupin 6 292 - -
Lapu9g00763 539 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 12 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00763 Lapu-Chr9 10422899 10427758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00763 11 300 Glycosyltransferase AT1G78280 24.749 4.12e-15 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lapu9g00763 Cupin_8 1.1e-21 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00763 - - gmx:100803814 895.96