Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00756 ATGCTCCCTCTCTTCTCCTCTTTCTCTGGTTTTCGATTTCAGTTGCAGCACAACGCGTTCGAAACATGCGATGTTAATTGGCACGATGGTAACTACAAAGAGCTCGGTTCCAAGATTCCTCCCCCCATGAGGAACTGGATCGAGAGCAAGTTGAGCCTAGAGCTCTTGAAGGCTGTGGAGAAGGCTGGCTATAAAACCCCTTCTCGGATTCAGATGGCAGCCATTCCCCTTGGCTTGCAGCAGCGTGATGTCATTGGCATTGCCGAGAATGGTTCCGGGAAAACCGCGGCGTTTGTGCTTCCCATGTTGAGCTACATCACAGGCTTCCTCCCATGA 336 0.5149 MLPLFSSFSGFRFQLQHNAFETCDVNWHDGNYKELGSKIPPPMRNWIESKLSLELLKAVEKAGYKTPSRIQMAAIPLGLQQRDVIGIAENGSGKTAAFVLPMLSYITGFLP* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00756 111 Pfam DEAD/DEAH box helicase 69 106 IPR011545 GO:0003676|GO:0005524
Lapu9g00756 111 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 107 IPR027417 -
Lapu9g00756 111 Gene3D - 14 108 IPR027417 -
Lapu9g00756 111 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 30 104 - -
Lapu9g00756 111 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 44 72 IPR014014 GO:0003724
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00756 Lapu-Chr9 10293392 10294142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00756 54 106 Eukaryotic Initiation Factors Gene Family AT5G11200 45.283 3.52e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00756 K12858 - atri:130802818 132.494