Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00752 ATGCATGGACGTGGAGGTGAGAAGGGGAAGGGGACTCGGCACATGTGGAAATCCCCCACACGTGGCGACTCGTCTCTGAACGCCGATGTTTCTTCATCTTCTTCTTCGTCGTCGTCGACAGTGAAGTCATTCTTTAAGGACGGTCGCAAAATTAGTGTTGGTGAATGTGCTCTTTTCAAACCATCTGAAGATCGCCCACCATTTATTGGTATAATTCGTTATCTGACAACTGGCAAAGATAGAAAGTTGAAGTTTGGTGTTAGTTGGCTCTATCGATCCATTGAAGTAAAACTCAGCAAGGGTGTGCCATTGGAGGCTGCTCCAAACGAAATCTTCTACACCTTCCACAAGGATGAGATTGATGCTGAAGCGTTGCTCCATCCTTGTAAAGTTGCATTTCTTCCTAAGGGTGCTGAATTTCCACCAGGGATTTCTTCATTTGTGTGCAGGAGGGTTTATGACATTGCAAACAAGTGTCTATGGTGGTTAAATGATCAAGATTATATTAATGATTGTCAAGAAGAAGTAGATAAACTATTATACAGGAATTGTGTAGAAATGCATGCAACAGTGCAGCCAGGTGGCCGATCTCCTAAGCCTATGAGTAGTCCAACATCAACATCACAGTTAAAATCTGCTTCAGATAGTGTCCAGAATAGTACTTCTTCGTTTCCATCCCACATTAAGGGGAGAAAAAGGGAAAGGGCAGATCAAGGCTCGGAGTCTGTCAAGCGAGAACGATCAATAAGAACTGAGGATGGGGATTCTGGTAATTTCCGGCATGATAACATTTTCAAGACAGAGATTGCAAAAATTACAGAGAAGGGAGGGCTTGTTGACGGTGAAGGAGTTGAAAAATTAGTGCAGCTGATGGTTCCTGATAGAAATGAGAAGAAGATAGATTTAGCTAGCCGGTCATTGCTTGCAGCTGTCATTGCAGCAACAGATAAGTTAGATTGTCTTAGTCAGTTTGTGCAGCTAAGGGGTTTGCCTGTATTTGATGAATGGCTCCAAGAGGTCCATAAAGGAAAGATTGGTGATGGTGATAAATCTGCTGAGGAATTTCTGTTGGTATTGCTTCGGGCACTTGATAAGCTTCCTGTAAATCTTCAGGCTTTACAAACATGCAACATTGGAAAGTCTGTGAATAATTTGCGAACTCACAAAAACACTGAAATTCAGAAGAAAGCAAGAGGTTTAGTTGATACATGGAAGAAACGCGTTGAAGCTGAAATGAACATAAATGATGCAAAGTCTGGTTCCGGTCCCAATGTCCACTGGCCTGCCAAATCACGTCCTTCTGATGTTGGTCAAGGTGGGAATAGACATTCAGGTGCATCATCAGATGTTGTCATGAAGAGTTCAGTTACACAGCTTTCTGCATCCAAAACTGCCTCCGTGAAGATTGTTCAGGGAGAGAATATTACTAGATCTGCATCAACATCTGCATTTCCGGGGCCTGCAAAGTCAGTGCCATCACCTGCAGCTGCGGCTGCAAACTTAAAAGATGGCCAGCCTCGTATTGTTGCTGTTAATGGAGGTTCTGATCTTCCCATGGCAAATGCAAGGGATGAGAAAAGTTGTAGTTCTAGTCAGTCGCACAACAACAGTCAATCTTGTTCTAGTGACCATGCTAAAACTGGAGGTCACTCGGTAAAGGAGGATGCCAGAAGCTCTACTGCTATGAGTGCAAATAAGATATCTGGAGGCTCTTCACGACATCGGAAGTCCATGAATGGATATTCAGGTTCAGCTCCATCTGTAGGGCAAAGGGAAACTGGATCAAGTAGGAATTCCTCCTTACACAAAAGTTTAACTTCGGAGAAAATATCTCAACCTGGATTGATGGATAAGGCAGTTGATGGAACTTCTCTTGAGGGGAATATTCCTAAGCTGATTGTTAAGATTCCAAACCAAGGTAGAAGTCCTGCACAAAGTGTCAGTGCTGGTTCTTTTGATGATCCTACAATCATGAATAGTCGAGCCTCATCCCCTGTTCTTCCGGATAAGCTTGATCAGTCTGATCACAGCCCAAAGGAAAAAAACGACCTCTATCGAGTGAATATTGGCTCAGATATTAATACTGAATCTTGGCAGAGCAATGATTTTAAAGACGTATTGACTGGCTCTGATGAGGGTGATGGATCACCTGCTGCAGTTACTGATGAAGAGCAGTGTCGGACTGGCAATGACTCTAAGAAGGCATTGGAGGTATCAAAAGCTGCTTCATCATCATCTGGAAATGAAAATAAAGCTGGCAATTTGCAGGATGCTTCATACAGCTCAATAAATGCTTTAATTGAAGGTGTCAAATACTCTGAAGCTGATGATGGTGGAATGAATCTTCTTGCTAGTGTGGCTGCTGGAGAGATATTGAATTCCGAATTGGTAACTCCAGCTGGATCTCCAGAAAGAAACACAGCTGCTGTTGAACAGTCATGCACAGACAATGGTGTTAAGTCCTCTGAAGAAAATCTTGTTCGGGATGAATGCCAATCAAATAATGGTCTTGATGGTGAACATAAGAATCTGGGTTCTGTAACAGGTGATCTAGCGGCAAATGATGAAAGTGATTCTGATTTTAAAGCTCCTGGAGGGAAAGCTGCAAGAGAGCTAAACAAGCATGTTAATGCTTGTAGTACGGATTTGCCACAGGTTACTGAAACTACTTTGGAAAGCAAAGGAAACTTAAATGAAAAATCTGGACCTACTTTGCTGGGTGGCCTTTCTGAAAATTCTGTACAAGATGCTAGAGATGATGACAAAAGCAAGAAGCTCCCGGAGGTTGTTCTGGGAATGAATGCTGGTGAAATTCATAATAAGGTCAGTTGTGTTGAAGAAGTTGAGGCGGAAGCAGCTAAAAAATTCTCACATAAAACTGTGGAAGGGAATCTACAGAGTGATAACTGTACTGCTGATGGATCAAGTGGTGGTGGACAGATAGTTAAAAAGCCTCCTGCTATACTTGTGCAGCCTGATTTGGCAAGAGGAAAAGATGATAATGTACTCCATTCTTCTGGTTATACTGTTGAAAAGGTTCCTAAAGACTTCACTGAACAGGAATCTGAAAAAACTGATGATGTTGATGCTGAGAATCATGTTAATCAGTCTAAACATAAAAGAAATGAGTCTGAAAGTGATGCCTTGACGATGCCTGAGAAAAGAGGTTTATGTTCTACTGTGACTGGTCTTGTTGCTGAACATGTAGAGGAGAATTTAGAAACGAAAAAGGTTCATGACCAACCTGCTAGAGAGGATCTTCCTGAAGATTCACTTCGTTCACAAGAAATGGATAAGCATCTTGATTCTAAAAGATCAAAATTGACTTCCACAGAAGCAGAGGATGCTGAGGAGTGCACCTCTACCACTGCAGATGCTTCTTCCATGTCTGCTGCAGCTTTGTCAGATGTGGATGCAAAAGTTGAATTTGATTTAAACGAAGGGCTCAATGCAGATGATGGAAGATGTGAGTTCAACAGCATTGCCACTTCTGGATGTGCACCTGCTGGTCGATTGATCAGTCCTGTGCCATTTCCTGCTTCATCTATGTCTGGTGGTATTCTTGCCCCAGTCACTGTGGCTTCTGCTGCAAAGGGGCACTTTGTGCCTCCTGAAGATTTATTGAGAAGTAAAGGGGAAATTGGTTGGAAGGGATCAGCTGCCACCAGTGCATTCAGGCCAGCCGAACCCAGAAAAGTTATGGAAATCCCTCTTGGTAGATCAACTACACCTATACCTGATGCTCCGGCTGGAAAGCAGAGTCGAGCACCATTGGATATTGACTTGAATGTGGCTGATGAAAGAATACTTGATGATATTTCTTGTGCTCGTCATGCAAATTCTATATCTCTTGCAGCTGATTGTCACGATCCTGTATGCAGTAAAATACCATCACCCGTTCGTGGCTCTGGAGGGCTTGGTCTTGACTTGAACCAAGCGGATGATGCTTCTGATATGGGCATTAGCTTGAGTAGTAATCATAAAATAGATGTGCCAACTATGCAGGTGAAGTCATCATTGGGTGGTCCACCAAATAGCGAAGTGAATGTCCACAGGGACTTTGATTTGAACAACGGACCTTGTATTGATGAAGTCACCACTGAATCCTCATTGTTCTCTCATCATGCCAGAAGCAGTGTGCCATCTCAATTACCTGTTTCTGGACTTAGAGTGGCTACTGCTGAGCCAGGCAACTTCTCTTGGCTTCCTTCCAGTGGCAACACCTATTCTGCTGTCACAATATCTTCAATTATGCCCGATAGAGGGGATCAGCCTTTTTCTATAGTTGCTCCAAATGGGCCACAGAGGTTGTTGGCTCCTGCTACTGGTGGCAACCCATTTGGACCTGATATTTATAGGGCCCCAGTATTGTCATCTTCTCCGGCAGTGTCATATCCGTCTGCTCCATTTGAATATCCTGTCTTCCCTTTCAACTCAAGCTTTCCTCTTCCAACAGCTTCTTTTTCTGCTGGATCAACTACTTATGTATATCCAACATCGGCCAATCGGCTTTGCTTTCCTGCAGTAAATTCACAGTTAATGGGGCCTGCTGGCACGGTTTCGTCTCATTACCCCAGGCCGTATATTGTTGGTCATACAGAAGGTAGCAATAGTGGTAGTGCTGAGACCAGTAGAAAATGGACAAGGCAGGGTTTAGATCTTAATGCTGGACCTGGGTGTTCAGACATGGATGGGAGAGATGAGAGTTCGCCTCTTCCATCTAGGCAACTTTCTGTTGCTAGTTCACAGGCCCTAGCTGAAGAGCAAGCAAGGATCCAGCTTACAGGTAGTGTTCGCAAGAGGAAGGAGCCCGATGGTGGGTGGGATGGCTACAACCAATCCTCATGGCAATAG 4854 0.4365 MHGRGGEKGKGTRHMWKSPTRGDSSLNADVSSSSSSSSSTVKSFFKDGRKISVGECALFKPSEDRPPFIGIIRYLTTGKDRKLKFGVSWLYRSIEVKLSKGVPLEAAPNEIFYTFHKDEIDAEALLHPCKVAFLPKGAEFPPGISSFVCRRVYDIANKCLWWLNDQDYINDCQEEVDKLLYRNCVEMHATVQPGGRSPKPMSSPTSTSQLKSASDSVQNSTSSFPSHIKGRKRERADQGSESVKRERSIRTEDGDSGNFRHDNIFKTEIAKITEKGGLVDGEGVEKLVQLMVPDRNEKKIDLASRSLLAAVIAATDKLDCLSQFVQLRGLPVFDEWLQEVHKGKIGDGDKSAEEFLLVLLRALDKLPVNLQALQTCNIGKSVNNLRTHKNTEIQKKARGLVDTWKKRVEAEMNINDAKSGSGPNVHWPAKSRPSDVGQGGNRHSGASSDVVMKSSVTQLSASKTASVKIVQGENITRSASTSAFPGPAKSVPSPAAAAANLKDGQPRIVAVNGGSDLPMANARDEKSCSSSQSHNNSQSCSSDHAKTGGHSVKEDARSSTAMSANKISGGSSRHRKSMNGYSGSAPSVGQRETGSSRNSSLHKSLTSEKISQPGLMDKAVDGTSLEGNIPKLIVKIPNQGRSPAQSVSAGSFDDPTIMNSRASSPVLPDKLDQSDHSPKEKNDLYRVNIGSDINTESWQSNDFKDVLTGSDEGDGSPAAVTDEEQCRTGNDSKKALEVSKAASSSSGNENKAGNLQDASYSSINALIEGVKYSEADDGGMNLLASVAAGEILNSELVTPAGSPERNTAAVEQSCTDNGVKSSEENLVRDECQSNNGLDGEHKNLGSVTGDLAANDESDSDFKAPGGKAARELNKHVNACSTDLPQVTETTLESKGNLNEKSGPTLLGGLSENSVQDARDDDKSKKLPEVVLGMNAGEIHNKVSCVEEVEAEAAKKFSHKTVEGNLQSDNCTADGSSGGGQIVKKPPAILVQPDLARGKDDNVLHSSGYTVEKVPKDFTEQESEKTDDVDAENHVNQSKHKRNESESDALTMPEKRGLCSTVTGLVAEHVEENLETKKVHDQPAREDLPEDSLRSQEMDKHLDSKRSKLTSTEAEDAEECTSTTADASSMSAAALSDVDAKVEFDLNEGLNADDGRCEFNSIATSGCAPAGRLISPVPFPASSMSGGILAPVTVASAAKGHFVPPEDLLRSKGEIGWKGSAATSAFRPAEPRKVMEIPLGRSTTPIPDAPAGKQSRAPLDIDLNVADERILDDISCARHANSISLAADCHDPVCSKIPSPVRGSGGLGLDLNQADDASDMGISLSSNHKIDVPTMQVKSSLGGPPNSEVNVHRDFDLNNGPCIDEVTTESSLFSHHARSSVPSQLPVSGLRVATAEPGNFSWLPSSGNTYSAVTISSIMPDRGDQPFSIVAPNGPQRLLAPATGGNPFGPDIYRAPVLSSSPAVSYPSAPFEYPVFPFNSSFPLPTASFSAGSTTYVYPTSANRLCFPAVNSQLMGPAGTVSSHYPRPYIVGHTEGSNSGSAETSRKWTRQGLDLNAGPGCSDMDGRDESSPLPSRQLSVASSQALAEEQARIQLTGSVRKRKEPDGGWDGYNQSSWQ* 1618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00752 1617 Gene3D - 32 273 IPR043151 -
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 1014 1050 - -
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 700 755 - -
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 1072 1128 - -
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 191 257 - -
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 413 447 - -
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 524 546 - -
Lapu9g00752 1617 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 319 422 IPR035441 -
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 1551 1617 - -
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 227 257 - -
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 1571 1590 - -
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 1072 1114 - -
Lapu9g00752 1617 ProSiteProfiles TFIIS N-terminal domain profile. 331 411 IPR017923 -
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 885 922 - -
Lapu9g00752 1617 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1617 - -
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 554 611 - -
Lapu9g00752 1617 Pfam BAH domain 50 157 IPR001025 GO:0003682
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 196 226 - -
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 1 17 - -
Lapu9g00752 1617 ProSiteProfiles BAH domain profile. 49 164 IPR001025 GO:0003682
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 639 667 - -
Lapu9g00752 1617 Pfam TFIIS helical bundle-like domain 359 408 IPR017923 -
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 1 41 - -
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 885 911 - -
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 636 685 - -
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 737 755 - -
Lapu9g00752 1617 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 283 412 IPR035441 -
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 18 41 - -
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 478 622 - -
Lapu9g00752 1617 CDD TFIIS_I 344 409 - -
Lapu9g00752 1617 SMART BAH_4 49 164 IPR001025 GO:0003682
Lapu9g00752 1617 SMART TFS2_5 337 410 IPR003617 GO:0005634
Lapu9g00752 1617 MobiDBLite consensus disorder prediction 964 1055 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00752 Lapu-Chr9 10118057 10126686 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lapu9g00752 BAH 1.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00752 - - gmx:100788512 2613.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g01444 4 31606871 31614991 Lapu9g00752 9 10118057 10126686 ECH
Lapu9g00752 9 10118057 10126686 Lapu9g00752 9 10118057 10126686 ECH