Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00750 ATGAGTGTAAAACCCATCTGGGTATTCTTCATTGGCATCTTTTTGTTTCTTCTACTGGCCAATTCAGAGGAAGAGGAGGTGATCAGGGCCCTAGTCACATTCATGGATAAATTGGCACCAGGATACGTACCAAGAGACCCTACGTGGGGTTGGAACCTTTCATCAGATCCCTGCATTCATAAGTGGCACGGTGTGAGCTGCTATTCAGACAACCAACACGTTAAGAGTGTGATTCTTGAGAAGTTCAATTTTGGTGGAGGTTTAGACGCCGGTTCTCTTTGCATTGCAAAGTCTCTTCAAAAGCTTAGCCTGAGGGACAACACTTTACATGATTCCATACCAGAGGATATAGGAAAGTGCAAGTCCTTGACTCGTTTGTTTTTAAGTGGGAACCAATTTTCTGGGGACCTTCCTATTTCTATTGGCAAGCTAGGTAACATGAAACGGCTTCATATTTCGGACAACCACTTCACTGGAGAGCTTCCTAACATGGTTCATGTTTCAAGTTTGATATCCTTCGTTGCTCAAAACAACAACTTCACTGGGAAGATTCCTACTTTTGACTTCTCCAACCTTGATGCGTTTAATGTCTCTAACAACAATTTACATGGTCCAGTTCCTGATGTCAGAGGCAAATTCCATGCTGACAGCTTTTCTGGGAATCCTAACTTATGTGGACAACCACTTTCAAATGCATGTCCTCCTCCACTACCACCACCACCTCCTCCACCACCACCTGAAAAGAAGGACAAAAAATTGTTCCCCAATGATTTGTCCATTTATTCAGGTTACTTAGTCCTTGGTTTAATTACGCTGATTTTCTTGACCTTTAAACTGTTATGTAAGTTCAAGACCAAAGAAAAAGAATTGGATGTTGAAAAGAAGGAAAAGGCACAAGAAACTGTTGGTATTGTTGCCAAGGCTAGTGGAATATTCAATTCCAATGGATCAAAGAATGGCACAGGGATCAGATCCGAGTATTCATTGACATCTTTGGAAAGTGGGATGACAACATCAGGTCTTGTTCTTCTTTCAAGTCGAACCCTTAGAGGATTGCAATTTGAGGACTTGCTTGGTGCTCCTGCTGAATTGATTAGGAGGGGAAAACACGGAAGCCTCTACAAGGTTATGCTCGATAATGGGGTGCTGTTGGCAGTGAAGAGGATTAAGGATTGGGGGATTTCAAAGCAAGATTTTCAGAGCAGGATGAATTTGATAGCCCAAGTGAAGCATCCACGCGTATTGCCACCTGTTGCGTACTATTGTTCTCAGCAAGAGAAGCTCCTAGCATATGAATACATGCAGAATGGTAGTCTCTTCATGTTGCTCTATGGATCTCAAAGTGGCCACTCTTTTGACTGGGGAAGCAGACTAAATGTTGCTGCTAAGATAGCTGAGGCTTTGACATATATGCATGAGGAGCTTCTTGAGAATGGAATAGCACATGGTAACTTAAAGTCAAATAACATTTTGTTTGACAAGAATATGGATCCATGCATAAGCGAATATGGCCTAATGATGGCAGAAAATCAAGATCAATTTGTCCTTTCGCACAACAAAGGCCTCAAAAGGAAAGATCTAATTGCAGCCACCTTCAAAGCTGATGTATATGCCTTGGGTGTGATACTTCTGGAGCTGCTGACAGGGAAAGTAATTAAAAACGATGGATTTGATCTAGTTAAATGGGTGAATTCAGTGGTCAGAGAGGAATGGACCATCGAAGTTTTTGACAAGTCCCTAATCTCACAGGGTGCTTCTGAAGAGAGGATGATGAATTTGTTGCAGGTAGCATTAAAATGCTTAAATCCTTCTCCAAATGATAGGCCAAGTATGAACCAAGTTGTTGTGATGACAAATGCTTTGATAGAGGAGGAAGAAAAATCCATATCCTTTGACACATGA 1902 0.4169 MSVKPIWVFFIGIFLFLLLANSEEEEVIRALVTFMDKLAPGYVPRDPTWGWNLSSDPCIHKWHGVSCYSDNQHVKSVILEKFNFGGGLDAGSLCIAKSLQKLSLRDNTLHDSIPEDIGKCKSLTRLFLSGNQFSGDLPISIGKLGNMKRLHISDNHFTGELPNMVHVSSLISFVAQNNNFTGKIPTFDFSNLDAFNVSNNNLHGPVPDVRGKFHADSFSGNPNLCGQPLSNACPPPLPPPPPPPPPEKKDKKLFPNDLSIYSGYLVLGLITLIFLTFKLLCKFKTKEKELDVEKKEKAQETVGIVAKASGIFNSNGSKNGTGIRSEYSLTSLESGMTTSGLVLLSSRTLRGLQFEDLLGAPAELIRRGKHGSLYKVMLDNGVLLAVKRIKDWGISKQDFQSRMNLIAQVKHPRVLPPVAYYCSQQEKLLAYEYMQNGSLFMLLYGSQSGHSFDWGSRLNVAAKIAEALTYMHEELLENGIAHGNLKSNNILFDKNMDPCISEYGLMMAENQDQFVLSHNKGLKRKDLIAATFKADVYALGVILLELLTGKVIKNDGFDLVKWVNSVVREEWTIEVFDKSLISQGASEERMMNLLQVALKCLNPSPNDRPSMNQVVVMTNALIEEEEKSISFDT* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00750 633 PANTHER OS05G0588300 PROTEIN 8 621 - -
Lapu9g00750 633 FunFam Inactive leucine-rich repeat receptor-like protein kinase 89 186 - -
Lapu9g00750 633 Gene3D Transferase(Phosphotransferase) domain 1 434 632 - -
Lapu9g00750 633 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Lapu9g00750 633 ProSiteProfiles Protein kinase domain profile. 359 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00750 633 SUPERFAMILY Protein kinase-like (PK-like) 363 617 IPR011009 -
Lapu9g00750 633 Gene3D Ribonuclease Inhibitor 190 230 IPR032675 -
Lapu9g00750 633 SUPERFAMILY L domain-like 46 229 - -
Lapu9g00750 633 MobiDBLite consensus disorder prediction 229 251 - -
Lapu9g00750 633 Gene3D Phosphorylase Kinase; domain 1 348 433 - -
Lapu9g00750 633 MobiDBLite consensus disorder prediction 229 244 - -
Lapu9g00750 633 Pfam Protein kinase domain 365 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00750 633 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00750 Lapu-Chr9 10086348 10088885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00750 48 615 Receptor kinase-like Gene Family AT1G48480 34.053 3.55e-94 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu9g00750 Pkinase 1.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00750 - - pvu:PHAVU_009G180700g 1068.91