Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00746 ATGGTGGCAAGGTCATGCTTGAATTTGTTAGACCTGGTATCAGGGGATATGCTGAATTTCCCTCAAACTCCCAGATCTCTTCCACGAGTTATGACTGATCCAGTAATCATTTCTCATGGAGATGGTAAACAAAGTAATGATGATGATTCAGGTGTTTTCTCATCTGAAAACCGTCGCAAGATAATTATAGTATCAAATTCTCTTCCTCTCAATGCAAAAAGGGATAGAGTATCTGGCAGATGGTGCTTTAGTTACGATGAGGATTCAATTTTTTGGCAGTTAAAGGATGGTCTCTCTCCTGATGCTGATGTTGTGTATGTGGGATCTCTGAAGGTTGATGTTGATGCAAGTGAGCAAGATAAAGTTTCCCTTCAGTTGCTGGAGGAATTCAATTGCTTGCCTACTTTTATTCCTTCAGAACTCTACAAACAATTCCATGATGGATTCTGCAAACAACATTTGTGGCCTCTATTCCATTACAAGTTGCCCATGTATCCAGGCAATCGCCGCTTTGATAGGTCACAGTGGCAGGCTTATGTTTCTGCTAACAAGATTTTTGCAGATAAAGTCATGGAGGTCCTTAATCCAGAAGATGATTATGTATGGATTCATGATTATCATCTTATGGTCCTTCCAACATTTTTGCGTAAGCGGTGTAGTCGAGTCAAGCTTGGTTTTTTCCTCCACAGTCCATTTCCTTCATCAGAAATTTATAAAACTCTACCTGTCAGAGGTGAAATTTTGAAAGCACTGCTTAATGCAGATTTAGTTGGTTTTCACACCTTTGATTATGCTCGCCATTTCCTCTCCTGCTGCAGGCGAATGCTAGGCTTGGAACATGAATCCAAGAGGGGTCACATTGGGCTTGAATACTCTGGCCGCACAATATTCATTAAAATTTTGCCTGCTGGGATTCACATGGGTCGACTTCAATATGCCTTAGATCACCCTTCCTCTTCAAACAAAGTCAGAGAAATCCACCAACAATTTAAGGGGAAAAAGCTTATTCTTGGTGTTGATGATATGGACATATTTAAAGGTGTCAGTTTAAAATTCTTGGCCATAGAACAACTCCTGCAGCAATATCCAGAAATGCAAGGTGAATTAATACTGATCCAAATTTTAAACCCCCCAAGTAGTTCTGACAACGATGTTGAGAATGCAAAGGAGGAGGCCTACATTACTGCCAAAAGGATAAATGAAAGGTTTGGTTTGGAAAGTTATGAACCTATCATCATCATTGACCGCCATGTTCCTTTTTATGAGAAGGCAGCCTATTATGCTTTGGCAGAATGTTGCATTGTGAATGCAGTTCGCGATGGTTTGAATTTGGTTCCATACAAGTACACTGTTTGTAGGCAGGGAAGTTCTAAAATGGATGAAGCCTTAGAAATTGCTTCTGACTCCCCGCGTGCAAGTGCACTTGTTGTTTCTGAGTTTATAGGTTGCTCTCCATCTCTTAGTGGGGCAATAAGGGTGAACCCATGGGATATTGATGCCGTAGCTGAAGCACTAAATTTGGCAATCACAATGCCTGATGGTGAGAAGCAGCTTCGACATGAGAAGCACTATAGATATGTTAGTTCTCATGATGTGGCCTACTGGGCTAAAAGTTTTGAGCAAGATCTAGTGTTTTCGTGCAAGGACCACCGTAGGAACTGTTGCTGGGGCATTGGCTTTGGTCTGAACTTCAGAATTTTGTCTCTGTCTCCTAGTTTCAGGAGGCTATCCATAGACCACATTGTCCCTGCATATAAAAGGAGCAGTTGCAGGGCAATCTTTTTGGATTATGATGGTACAGTTGTACCTCAAGCATCCATTGTTAAAGCCCCAAGTCCTGAAGTCATATCTGTGCTAAATAATCTTTGCAGTGATGTTAACAACACTGTGTTTATTGTTAGTGGCAGGGGAAAAATTTCTTTGAGTGAATGGTTTGATCAGTCTGAGAATCTTGGTATAGCAGCTGAGCATGGTTATTTTATAAGGTGGGGTAAGCATGCTAGTTGGCAAATGAGTCGTGTAGATACAGATTTTGCCTGGAAAAGAATTGCTGAACCTGTGATGAGATCTTATATGGAGGCCACAGACGGCTCTTTTGTAGAGACCAAAGAGAGTGCCTTGGTATGGCATTACCGTGATGCAGATCCTGATTTTGGATCTTGGCAAGCCATGGAGCTGTTGGATCACCTTGAAAATGTACTTGCAAATGAGCCTGTTGTTGTAAAAAAAGGACAACATATCATCGAAGTCAAGCCTCAGGGCATTACTAAAGGGTTAGTTGCACAGGAAGTTCTTTCTACGTTAACCAAGAAGGGTAAATTGCCAGATTTTGTACTGTGCATTGGTGATGATAGGTCTGATGAGGATATGTTTGAGAGCATTTTAACCAAACCTTACAGTGGTACCTCCTCCTCAGCACCAGAAATCTTTGCATGCACTGTTGGACAAAAACCAAGCAAAGCTAAATACTACCTGGATGACACCATGGATGTGATGTCATTACTTGAGGGTCTTGGTGCTGTTTCAGTGCCTAAATCAAGATATTCCACAGAAACCCCTTTTGAGAAAAGAGAAGCATGTTTTGAGAATATCCTTTAA 2598 0.4126 MVARSCLNLLDLVSGDMLNFPQTPRSLPRVMTDPVIISHGDGKQSNDDDSGVFSSENRRKIIIVSNSLPLNAKRDRVSGRWCFSYDEDSIFWQLKDGLSPDADVVYVGSLKVDVDASEQDKVSLQLLEEFNCLPTFIPSELYKQFHDGFCKQHLWPLFHYKLPMYPGNRRFDRSQWQAYVSANKIFADKVMEVLNPEDDYVWIHDYHLMVLPTFLRKRCSRVKLGFFLHSPFPSSEIYKTLPVRGEILKALLNADLVGFHTFDYARHFLSCCRRMLGLEHESKRGHIGLEYSGRTIFIKILPAGIHMGRLQYALDHPSSSNKVREIHQQFKGKKLILGVDDMDIFKGVSLKFLAIEQLLQQYPEMQGELILIQILNPPSSSDNDVENAKEEAYITAKRINERFGLESYEPIIIIDRHVPFYEKAAYYALAECCIVNAVRDGLNLVPYKYTVCRQGSSKMDEALEIASDSPRASALVVSEFIGCSPSLSGAIRVNPWDIDAVAEALNLAITMPDGEKQLRHEKHYRYVSSHDVAYWAKSFEQDLVFSCKDHRRNCCWGIGFGLNFRILSLSPSFRRLSIDHIVPAYKRSSCRAIFLDYDGTVVPQASIVKAPSPEVISVLNNLCSDVNNTVFIVSGRGKISLSEWFDQSENLGIAAEHGYFIRWGKHASWQMSRVDTDFAWKRIAEPVMRSYMEATDGSFVETKESALVWHYRDADPDFGSWQAMELLDHLENVLANEPVVVKKGQHIIEVKPQGITKGLVAQEVLSTLTKKGKLPDFVLCIGDDRSDEDMFESILTKPYSGTSSSAPEIFACTVGQKPSKAKYYLDDTMDVMSLLEGLGAVSVPKSRYSTETPFEKREACFENIL* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00746 865 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 839 IPR001830 GO:0003824|GO:0005992
Lapu9g00746 865 FunFam Trehalose-6-phosphate synthase 2 674 753 - -
Lapu9g00746 865 Gene3D Glycogen Phosphorylase B; 312 528 - -
Lapu9g00746 865 NCBIfam trehalose-phosphatase 591 837 IPR003337 GO:0003824|GO:0005992
Lapu9g00746 865 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 543 - -
Lapu9g00746 865 Pfam Trehalose-phosphatase 594 828 IPR003337 GO:0003824|GO:0005992
Lapu9g00746 865 Gene3D Glycogen Phosphorylase B; 52 311 - -
Lapu9g00746 865 Gene3D - 673 753 - -
Lapu9g00746 865 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 311 - -
Lapu9g00746 865 CDD HAD_TPP 592 832 - -
Lapu9g00746 865 Pfam Glycosyltransferase family 20 60 543 IPR001830 GO:0003824|GO:0005992
Lapu9g00746 865 FunFam Trehalose-6-phosphate synthase 10 721 849 - -
Lapu9g00746 865 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 590 707 - -
Lapu9g00746 865 CDD GT20_TPS 60 543 IPR001830 GO:0003824|GO:0005992
Lapu9g00746 865 Gene3D - 593 825 IPR023214 -
Lapu9g00746 865 SUPERFAMILY HAD-like 591 839 IPR036412 -
Lapu9g00746 865 NCBIfam HAD-IIB family hydrolase 592 793 IPR006379 -
Lapu9g00746 865 FunFam Alpha,alpha-trehalose-phosphate synthase 313 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00746 Lapu-Chr9 9962677 9968778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00746 1 865 Trehalose Biosynthesis Gene Families AT1G23870 65.629 0.0 1209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00746 K16055 - gmx:100812031 1650.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00746 9 9962677 9968778 Lapu9g00746 9 9962677 9968778 ECH