Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00744 ATGAGCAGCGATTTCTATCGACTGGCAGTTTCATCTCACTTCAGCAGTTTCCCGAAATCCTTCTCTCTGCGAAAGAAAGTTCCATGGTGGTACCAAATCCTAAACCCTCGATCGAAGTTCGTGGCGAAATGGAACCGAACGTTCCTCTATGTCTGCATCGCAGCGCTCTTCCTGGACCCTCTCTACTTCTATTTCCCCATCACGGGGGACAAGGCCTGCATGCAGACCGACCTCGTCCTCGGAGTCTTTGTCACCTTCTCGCGCACCGTCGCCGACCTCTTCTTTCTGTTCCACATGGTGCTCAAGTTCCGCACCGCCTATGTCGCTCCCACCTCTCGCGTTTACGGCCGCAAAGAACTCGTCACGGAGCCTCGTGAGATTGCCTCACGCTACCTCAAATCTGATTTCATTATTGATCTCCTCGCCACCCTTCCTCTTCCTCAGATAGTGGTCTGGTTCGTGATTCCGGCGGTGAAAGATTCTACGGTGGCTCATGTAAACCACACCCTGTCCTTGATTGTTCTCATTCAGTTTATTCCTAGGTTGTTTCAGATATTTCCTCTGCAACGGAGAATCGTGAAGACTAGTGGACTTATTGCCAAAACTGCCTTGGCAGGAGCTTTATACAATCTTGGTTCCTACATGCTTGCCAGCCATGTTTTAGGAGCTTCGTGGTACGTGGCATCCATTCAGAGGCAGTACGAGTGTTGGATAATAACATGCAAAAAGGAGATGAACAGAACGCACTCTCCATCTTGTAATCCTTCGTTTCTTGACTGTGCTACCCTCGCCCACCACGAAAGGCAAGCTTGGTTCAAACGCACCAGAGTGCTTAGTGATTGCGACGCCCTAAATTTCAAAAACGAGTTTCAGTTTGGACTCTTCGCTGATGCTTTTACCGATCATGTTTCCTCATCAAGATTCGTCCAAAAATACTTTTACTGCCTCTGGTGGGGTTTGAAGAATCTAAGTTCATACGGACAAAATCTTCAGACTAGCACTTACAGTGGTGAAACATTGTTTTCAAGTTTCATATGCATCGCAGGTCTGATCCTGTTCGCGCATCTCATTGGTAACATGCAGAATTATCTGCAATCTTCGACCGCAAGAGTTGAAGAGTGGAGACTTAAACAAAAAGATACAGAAGAGTGGATGAATCACCGGCAGCTCCCACCAGAACTGCAACAACGTGTTCGGAGGTTTGTTCAATATAAATGGCTGGCCACCAGAGGAGTAGACGAAGAAGCCATTTTGCGTTCTTTGCCGTTGGACATTCGCCGCCAGATTCAAAGGCATCTCTGTCTTGACATTGTTCGTCGGGTTCCATTTTTCGGGCAAATGGATGACCAGCTTCTGGACGCAATATGCGAGCGGCTGGTGTCGTCGCTGAACACGAAGGACACGTACATCGTGCGCGAAGGGGATCCGGTGAGGGAGATGCTGTTCATCATCAGAGGGCAGGTGGAGAGCTCCACCACCGACGGTGGCAGAACAGGGTTCTACAACTCCATCACCCTCCGCCCGGGCGACTTCTGCGGCGAGGAGTTGCTCACGTGGGCTCTCATGATCTCTTCCAGCCTAAACCTCCCCTCCTCCACTCGCACCGTGAAGTCCCTCACCGAAGTCGAGGCCTTCGCGCTCCGCGCTGAGGACCTCAAGTTCGTGGCCAGCCAGTTCAAGCGCCTCCACAGCAAGAAGCTGCAGCACGCCTTCCGGTACTACTCCCACCAGTGGCGGGCCTGGGGGGCCCACTTCATCCAGGCCGCGTGGCGCCGCCACCGCAAGAGGAAACTGGCCATGGAGCTACTGGGGAAGGAGAGCCTGTACTACACCAATGTGATCGAGATAGAAGATGATGATGATGATGATGATGTTGGTGATGGAGGTGGCGGTGGTGAGAGTTCGATTGAGCAAAGTGTGGGGCCTTTTCAGAATCTTGGGGCTACCGTTTTGGCTTCCAAGTTCGCTGCCAACACCAGAAAAGGAAAGGTTCAGAAGGTCAAAATTAACCTTCCTGATTCTGATAGTTTGAAGATGCCCAAGATGTTCAAGCCTACGGAACCCGATTTCTCAACTTTCCATGATTAA 2088 0.5086 MSSDFYRLAVSSHFSSFPKSFSLRKKVPWWYQILNPRSKFVAKWNRTFLYVCIAALFLDPLYFYFPITGDKACMQTDLVLGVFVTFSRTVADLFFLFHMVLKFRTAYVAPTSRVYGRKELVTEPREIASRYLKSDFIIDLLATLPLPQIVVWFVIPAVKDSTVAHVNHTLSLIVLIQFIPRLFQIFPLQRRIVKTSGLIAKTALAGALYNLGSYMLASHVLGASWYVASIQRQYECWIITCKKEMNRTHSPSCNPSFLDCATLAHHERQAWFKRTRVLSDCDALNFKNEFQFGLFADAFTDHVSSSRFVQKYFYCLWWGLKNLSSYGQNLQTSTYSGETLFSSFICIAGLILFAHLIGNMQNYLQSSTARVEEWRLKQKDTEEWMNHRQLPPELQQRVRRFVQYKWLATRGVDEEAILRSLPLDIRRQIQRHLCLDIVRRVPFFGQMDDQLLDAICERLVSSLNTKDTYIVREGDPVREMLFIIRGQVESSTTDGGRTGFYNSITLRPGDFCGEELLTWALMISSSLNLPSSTRTVKSLTEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRAWGAHFIQAAWRRHRKRKLAMELLGKESLYYTNVIEIEDDDDDDDVGDGGGGGESSIEQSVGPFQNLGATVLASKFAANTRKGKVQKVKINLPDSDSLKMPKMFKPTEPDFSTFHD* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00744 695 SMART cnmp_10 443 574 IPR000595 -
Lapu9g00744 695 SUPERFAMILY Voltage-gated potassium channels 36 365 - -
Lapu9g00744 695 Gene3D - 46 367 - -
Lapu9g00744 695 SUPERFAMILY cAMP-binding domain-like 372 568 IPR018490 -
Lapu9g00744 695 Gene3D Jelly Rolls 441 561 IPR014710 -
Lapu9g00744 695 MobiDBLite consensus disorder prediction 674 695 - -
Lapu9g00744 695 CDD CAP_ED 443 574 IPR000595 -
Lapu9g00744 695 ProSiteProfiles cAMP/cGMP binding motif profile. 443 573 IPR000595 -
Lapu9g00744 695 FunFam Cyclic nucleotide-gated ion channel 1 441 559 - -
Lapu9g00744 695 Pfam Ion transport protein 44 371 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lapu9g00744 695 Gene3D Helix hairpin bin 369 434 - -
Lapu9g00744 695 MobiDBLite consensus disorder prediction 619 639 - -
Lapu9g00744 695 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 25 690 - -
Lapu9g00744 695 Pfam Cyclic nucleotide-binding domain 466 554 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00744 Lapu-Chr9 9906507 9911581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00744 8 690 Ion Channels AT3G48010 63.636 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00744 K05391 - gmx:100783672 1263.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00744 9 9906507 9911581 Lapu9g00744 9 9906507 9911581 ECH