Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00740 ATGAAGAAGAGATTAGCAAGCTCCAGCAATGATTCCACTAAACTTGATCGCAAAACCATCGAAAGAAACCGCAGAATCCACATGAAATCCCTCTGCCATCAGCTTGGTTCTCTTATTCCTCCCAACCTCAAACCACCCAAATCCAAGCTGATGCTAGGGCAGCAGGACCAGCTGGATCTTGCAGCAAGGTATATAAAACACATGAGAGAGAGAATAGAGAAATTGAAGAGGCAGAAGGAGCAAGCCATGTCAGACCAACGCAGTGGTAGAAAAATGTCGGATAAAAACGTTGACACCAAATTGCCAATACTCGAGCTAAGAGACTTGGGTTCCGGCATCGAAGTGATGCTGGTGAGTGGGTTGAACAAGACATTCATGTTGTACGAAGTAATTAGCGTTCTTGAGGAAGAAGGTGCCGAAGTTGTCACTGCAAGCTTCTCAACTGTCGGCGACAAGTTATTTTACGTTGTTCATGCTCAGGTTAAAATATCAAGAGTTGGAGTAGAGACAACAAGGGTAAAGGATAGACTTCAAGAATTTATTGCTCCCTTAGAAATTTGGTCGGAAGACATCTGA 576 0.4375 MKKRLASSSNDSTKLDRKTIERNRRIHMKSLCHQLGSLIPPNLKPPKSKLMLGQQDQLDLAARYIKHMRERIEKLKRQKEQAMSDQRSGRKMSDKNVDTKLPILELRDLGSGIEVMLVSGLNKTFMLYEVISVLEEEGAEVVTASFSTVGDKLFYVVHAQVKISRVGVETTRVKDRLQEFIAPLEIWSEDI* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00740 191 Coils Coil 58 85 - -
Lapu9g00740 191 SMART finulus 18 74 IPR011598 GO:0046983
Lapu9g00740 191 MobiDBLite consensus disorder prediction 75 94 - -
Lapu9g00740 191 FunFam Transcription factor bHLH162 5 96 - -
Lapu9g00740 191 Pfam Helix-loop-helix DNA-binding domain 17 68 IPR011598 GO:0046983
Lapu9g00740 191 Gene3D - 4 97 IPR036638 GO:0046983
Lapu9g00740 191 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 12 68 IPR011598 GO:0046983
Lapu9g00740 191 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 9 180 - -
Lapu9g00740 191 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 86 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00740 Lapu-Chr9 9865864 9867553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00740 7 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 34.225 7.89e-26 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu9g00740 HLH 6.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00740 - - gmx:100809363 310.842