Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00716 ATGAGTTTTGCTGAAACAAGAAAAAGAACACAAAGCACAAGAAAAGAAGGAGGATCATCATTAATGTCAGAGCAGGAAACCGATTCATGGGGCTTCCTGTTTGTCTGTTTCTTGATCCTTTTCTCAGGTAAATTAGTTGTTGGGGATTCGTTAGACACTGACGCGAAAGTTCTGCTGAAGCTGAAATCTTATTTGCAAGCCCAAACTCGTGCAAATAGAGGAGGGTACATAAGCTGGAACAAGAACAGTTCAAATCCTTGTGATTGGTCAGGAATCGATTGCAGCCTCTTGAACGGGACAACAAGGAGGGTTGTGAAAGTAGATATCTCTTACAGTGACATATATGGTAACATATTCGATGGCTTCTCTAATCTCACTGAGCTCAGACACCTTGACATCTCTTGGAATTCTCTCTCTGGGGGGATTCCTGAGGACTTGAGGACGAGCCACAAGCTTGTGTATCTCAATCTTTCCCATAATACTCTCGAGGGGGAGTTGAATCTGAAGGGTTTGACTCAGTTGCAAACAGTGGACTTGTCTGTTAATAGGTTTCATGGGGAACTTGGGCTGAGTTTCCCTGCCATTTGTGACAGTTTGGTGACTTTAAATGTCTCAGATAATCACTTGAGTGGTGGGATTCATGGCTTCTTTGATCAATGCTTGAGGCTGCAGCACTTGGATTTGAGCACCAACCATCTGAATGGGACCTTGTGGACTGGATTTTCCAGGCTTAGAGAGTTTTCAATCTCAGAAAATTTTCTCACTGGGGTTGTTCCTCCTCAGGCTTTTCCAGTTAACTGTAGCATTGAAAAACTGGACCTTTCAGTGAATGGATTTGTGGGTAAGGCCCCCAAGGAGGTGTCTAACTGCAAGAATTTAGTGGTTCTCAACCTTTCTAGTAACAATTTCACTGGAGATATTCCCCGTGAAATTGGTTCCATTTCTGGTCTTCAGGGATTGTTCTTGGAGAACAATACTTTCTCAAGGGATATCCCACAGACCCTTTTGACCTTGACCAATTTGTTCATCTTGGATTTGAGCAGAAATAAATTTGGTGGGGATGTGCAGGAGATTTTTGGGAAATTCAAGCAATTGAAGTTTCTTGTGCTGCACTCAAATTCCTACACTGGAGGGTTGAACTCTTCTGGCATTTTTACATTGACAAACCTTAGCCGCTTGGACTTAAGCTTCAATAATTTTTCTGGTTCATTACCTATTGAAATCTCACAAATGTCTTCACTTGCTTTCTTAACCTTAACCTACAACCAATTCTCTGGACCTATTCCTTCTGAATTGGGAAAGTTGACTCGCCTTATGGCACTTGATCTTGCCTTCAATAGTTTCAGTGGACCGATCCCACCAAGCCTTGGAAACTTGCCTTCTCTGTTATGGCTAACCCTTTCAGATAATTCATTAACCGGAGAAATCCCACCAGAGTTGGGAAACTGCTCAAGCTTATTATGGCTAAACCTTGCAAACAACAAACTACATGGAAACATTCCTTCCAATCTAGCAAGAATTGGAAGGAATGCAAGGGCCACATTTGAATCAAATGAAAAGAGTCTCGGGGGAGTTGTTGCTGGCAATAGTGAGTGCTTAGCAATGAAGAGATGGATACCTGCTGATTACCCTCCGTTCAGCTTTGTTTATACCATCCTGACAAGGAAGAATTGTAGGGCCCTTTGGGACAGGTTGCTCAAAGGATATGGTATCTTCCCCATGTGTACATCTGAGCCCTCTGCTAGATCATCACATATAGCAGGGTATATTCAGCTAAGTGGGAACGATTTGAGTGGTGAGATTCCTTCAGAAATTGGGACAATGGTAAACTTTAGCATGTTGCATTTGGGAGATAACATGTTCACTGGGAAATTCCCTCCAGGGATGATAGGTTTACCACTTGTAGTCTTGAACATGACCAGAAACAATTTTTCTGGTGAAATTCCAAGTGAAATTGGCAACATGAAGTGTCTACAGGATCTTGATTTGTCTAGTAACAACTTCTCTGGACCATTTCCCATAAGTCTGGCACACTTGGATGAGCTTAGCAGGTTCAACATCTCATACAATCCCCTCATATCTGGTACAGTCCCACCAGCTGGACACTTACTCACTTTTGACAAGGATTCATATTTGGGTGACCCCCTCTTGAACCTCCCTAAGTTCTTTAACATCTCTGATGATAGAAATATTACTTTACACAGAGTCTTGAAAAATCCCACAAAATGGTCTTTGGTTTTGGCTCTAGGACTGACTATCATGGTCTTTGGACTTCTTTTCCTTGTAATATGTTTCTTGGTTAAAAGTCCATCTGTGGAAAGAGGATACATCAAGAAGAATACAAAGAAGCTAGCACATGATTTAGGCAGCTCCGGATCATCACCATGGTATTCTGACACTGTTAAGATATTCCACCTGAACAAGACAGTTTTCACACATGAAGACATCTTGAAAGCAACCTCCAACTTCACAGAGGAGAGAGTCATAGGAAGGGGTGGCTATGGAACAGTATATAGAGGGTCGTTTCCAGATGGGAGAGAGGTGGCGGTGAAGAAGCTCCAGAGGGAAGGAACTGAGGGTGAAAAAGAATTCAGAGCTGAAATGAAGGTTCTGAGTGGTCATGGATTTAGCTGGCCTCATCCAAACCTTGTCACACTCTATGGTTGGTGCCTCTATGGTTCACAGAAGATACTTGTTTATGAGTACATAGGAGGTGGAAGCTTGGAGGAACTTGTGACTGATACAAAAAGGTTGAGATGGAGGAGGCGCCTAGAAGTGGCAATTGATGTGGCTAGGGCACTTGTCTATTTGCACCATGAGTGCTACCCTTCTATTGTGCATAGAGATGTGAAGGCTAGTAATGTGTTGCTAGACAAGAATGGGAAGGCCAAGGTCACAGACTTTGGACTTGCTAGGATTGTTGATGTTGGAGACAGTCATGTGAGCACTATAGTAGCTGGCACAGTGGGGTATGTTGCACCAGAATATGGACAAACATGGAAAGCCACCACAAAAGGGGATGTGTACAGTTTTGGGGTGTTAGTTATGGAGCTAGCAACTGGGAGAAGAGCAGTGGATGGAGGGGAAGAGTGTTTGGTGGAATGGACTAGGCGTGTTATGATGGGTTCTGGAAGACAAGGGTTAGTTCAAGTGCCAGTTTTGTTGAAGGGAAGTGAGGTGGTTGAGGGTGCTACGGAGATGGGTGAGTTGCTCCAAGTTGGAGTGAAGTGCACACATGATGCACCACGGGCTAGGCCTAACATGAAGGAGGTTCTAGCTATGCTTATTAAGATATATGATCCCACTGGGGACTCAAATTATGGACACCTTGTGTAG 3336 0.4341 MSFAETRKRTQSTRKEGGSSLMSEQETDSWGFLFVCFLILFSGKLVVGDSLDTDAKVLLKLKSYLQAQTRANRGGYISWNKNSSNPCDWSGIDCSLLNGTTRRVVKVDISYSDIYGNIFDGFSNLTELRHLDISWNSLSGGIPEDLRTSHKLVYLNLSHNTLEGELNLKGLTQLQTVDLSVNRFHGELGLSFPAICDSLVTLNVSDNHLSGGIHGFFDQCLRLQHLDLSTNHLNGTLWTGFSRLREFSISENFLTGVVPPQAFPVNCSIEKLDLSVNGFVGKAPKEVSNCKNLVVLNLSSNNFTGDIPREIGSISGLQGLFLENNTFSRDIPQTLLTLTNLFILDLSRNKFGGDVQEIFGKFKQLKFLVLHSNSYTGGLNSSGIFTLTNLSRLDLSFNNFSGSLPIEISQMSSLAFLTLTYNQFSGPIPSELGKLTRLMALDLAFNSFSGPIPPSLGNLPSLLWLTLSDNSLTGEIPPELGNCSSLLWLNLANNKLHGNIPSNLARIGRNARATFESNEKSLGGVVAGNSECLAMKRWIPADYPPFSFVYTILTRKNCRALWDRLLKGYGIFPMCTSEPSARSSHIAGYIQLSGNDLSGEIPSEIGTMVNFSMLHLGDNMFTGKFPPGMIGLPLVVLNMTRNNFSGEIPSEIGNMKCLQDLDLSSNNFSGPFPISLAHLDELSRFNISYNPLISGTVPPAGHLLTFDKDSYLGDPLLNLPKFFNISDDRNITLHRVLKNPTKWSLVLALGLTIMVFGLLFLVICFLVKSPSVERGYIKKNTKKLAHDLGSSGSSPWYSDTVKIFHLNKTVFTHEDILKATSNFTEERVIGRGGYGTVYRGSFPDGREVAVKKLQREGTEGEKEFRAEMKVLSGHGFSWPHPNLVTLYGWCLYGSQKILVYEYIGGGSLEELVTDTKRLRWRRRLEVAIDVARALVYLHHECYPSIVHRDVKASNVLLDKNGKAKVTDFGLARIVDVGDSHVSTIVAGTVGYVAPEYGQTWKATTKGDVYSFGVLVMELATGRRAVDGGEECLVEWTRRVMMGSGRQGLVQVPVLLKGSEVVEGATEMGELLQVGVKCTHDAPRARPNMKEVLAMLIKIYDPTGDSNYGHLV* 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00716 1111 Gene3D Phosphorylase Kinase; domain 1 791 902 - -
Lapu9g00716 1111 Pfam Leucine rich repeat N-terminal domain 52 95 IPR013210 -
Lapu9g00716 1111 SUPERFAMILY L domain-like 590 694 - -
Lapu9g00716 1111 Pfam Leucine rich repeat 437 496 IPR001611 GO:0005515
Lapu9g00716 1111 Gene3D Ribonuclease Inhibitor 50 194 IPR032675 -
Lapu9g00716 1111 ProSitePatterns Protein kinases ATP-binding region signature. 829 852 IPR017441 GO:0005524
Lapu9g00716 1111 Gene3D Transferase(Phosphotransferase) domain 1 904 1106 - -
Lapu9g00716 1111 ProSitePatterns Serine/Threonine protein kinases active-site signature. 945 957 IPR008271 GO:0004672|GO:0006468
Lapu9g00716 1111 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 260 355 - -
Lapu9g00716 1111 SUPERFAMILY L domain-like 102 309 - -
Lapu9g00716 1111 Gene3D Ribonuclease Inhibitor 266 355 IPR032675 -
Lapu9g00716 1111 CDD STKc_IRAK 829 1098 - -
Lapu9g00716 1111 FunFam Leucine-rich repeat receptor protein kinase MSP1 787 902 - -
Lapu9g00716 1111 Gene3D Ribonuclease Inhibitor 356 529 IPR032675 -
Lapu9g00716 1111 Pfam Protein kinase domain 823 1092 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00716 1111 SUPERFAMILY Protein kinase-like (PK-like) 801 1096 IPR011009 -
Lapu9g00716 1111 SMART LRR_typ_2 387 411 IPR003591 -
Lapu9g00716 1111 SMART LRR_typ_2 459 483 IPR003591 -
Lapu9g00716 1111 SMART LRR_typ_2 338 361 IPR003591 -
Lapu9g00716 1111 SMART LRR_typ_2 125 149 IPR003591 -
Lapu9g00716 1111 FunFam Putative LRR receptor-like serine/threonine-protein kinase 362 524 - -
Lapu9g00716 1111 ProSiteProfiles Protein kinase domain profile. 823 1098 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00716 1111 PANTHER LEUCINE RICH REPEAT KINASE 2 384 1099 - -
Lapu9g00716 1111 Pfam Leucine Rich Repeat 128 146 IPR001611 GO:0005515
Lapu9g00716 1111 SMART serkin_6 823 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00716 1111 MobiDBLite consensus disorder prediction 1 22 - -
Lapu9g00716 1111 SUPERFAMILY L domain-like 241 502 - -
Lapu9g00716 1111 Gene3D Ribonuclease Inhibitor 588 730 IPR032675 -
Lapu9g00716 1111 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 903 1103 - -
Lapu9g00716 1111 Gene3D Ribonuclease Inhibitor 195 265 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00716 Lapu-Chr9 9090785 9094594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00716 87 1098 Receptor kinase-like Gene Family AT5G07280 32.710 1.26e-144 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Lapu9g00716 Pkinase 3.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00716 - - gmx:100781769 1940.24