Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00713 ATGGCTCTCTTCCGAAGGTTCTTTTACCGGAAACCACCCGATCACCTCCTCGAGATCTCCGACAGACTCTATGTTTTTGATTGTTGCTTCTCCAAGAATGTGTTGGAGGAAGAGGAGTACAAGGTCTATATTGGGGGGGTTGTGGCACAGCTACAGGATCACTATCCGGATGCTTCTTTCATGGTGTTCAATTTCAGAGAAGGGGATAGGCGCAGTCGAATTTCAGACATAATGTCTCAGTATGAGATGACAGTTATGGAGTACCCTCGACAATACGAGGGTTGTCCCCTTTTGCCTTTGGAGATGATTCACCACTTCCTTCGGTCAAGTGAGAGCTGGTTGTCTTTGGAGGGCCAGCAAAACGTGCTTTTGATGCACTGTGAAAGGGGTGGTTGGCCTGTGCTTGCGTTTATGCTAGCTGGTCTTCTGTTGTACAGGAAACAGTACAATGGGGAACACAAGACTCTTGAAATGGTGTATAAGCAAGCACCTAGAGAACTTCTCCACCTTCTATCTCCTTTGAATCCACAACCTTCTCATTTGAGATATCTTCAGTACATTTCCAGGAGGCATTTGGGTTCTCAGTGGCCTCCACCAGAAACACCCTTATATTTGGATTGCATTATTCTTAGGGTCCTTCCATTGTTTGATGGTGGAAAAGGATGCAGACCAGTTGTGCGTGTCTATGGTCCAGACCCTTCAAGACCTTCAAACAGAAGTTCTAAGCTTCTTTCCTCAACTTCAATGGGCCAAAATCACGCTCGCCACTACTTGCAGGCAGAATGTATGCTCGTGAAAATTGACATCCGTTGTCATGTTCAAGGGGATGTGGTTCTAGAGTGCATACATTTAAGTGATGATTTTGTTCGTGAGGAGGTGATGTTCAGAGTCATGTTTCATACCGCGTTTGTACGGTCAAATATATTGATGCTGAGCCGCGATGAAATTGATATTCAGTGGGATGCAAAGGATCAGTTCCCCAAGGACTTCAAATTTGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTAATCTAAACACAGTTGATGCGACTGAAGACGCAAGCGACACAGAATGTGCTTCTCCTGAGGCTGAAGAATTCTATGAAGCAGAAGAGATCTTCAGCAATGTAATTGATAGTAGATGA 1149 0.4482 MALFRRFFYRKPPDHLLEISDRLYVFDCCFSKNVLEEEEYKVYIGGVVAQLQDHYPDASFMVFNFREGDRRSRISDIMSQYEMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYNGEHKTLEMVYKQAPRELLHLLSPLNPQPSHLRYLQYISRRHLGSQWPPPETPLYLDCIILRVLPLFDGGKGCRPVVRVYGPDPSRPSNRSSKLLSSTSMGQNHARHYLQAECMLVKIDIRCHVQGDVVLECIHLSDDFVREEVMFRVMFHTAFVRSNILMLSRDEIDIQWDAKDQFPKDFKFEVLFLDADAVIPNLNTVDATEDASDTECASPEAEEFYEAEEIFSNVIDSR* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00713 382 Gene3D - 207 336 - -
Lapu9g00713 382 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Lapu9g00713 382 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Lapu9g00713 382 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 188 IPR029021 -
Lapu9g00713 382 Gene3D Protein tyrosine phosphatase superfamily 13 206 IPR029021 -
Lapu9g00713 382 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 199 336 IPR035892 -
Lapu9g00713 382 PANTHER FORMIN-J 1 379 - -
Lapu9g00713 382 SMART PTEN_C2_2 198 338 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00713 Lapu-Chr9 8989256 9001047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00713 1 363 FH2 protein (formin) Gene Family AT5G07740 75.482 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00713 - - pvu:PHAVU_009G184800g 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00713 9 8989256 9001047 Lapu9g00713 9 8989256 9001047 ECH