Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00710 ATGAGGGGTGGGAGAAGGAGGAGTATGATCAAGCTTAAGTTTAGCAAGATCTACTCATTTGCCTGTGGTAAAACAACCTTGAAGAGAGAACATTCGCGGATTGGAGGACATGGTCATTCTAGGGTGGTTTTCTGCAATGAACCTGATAGGTTCGAGGGAGGGGTTTTCAATTATGCTGATAATTCTGTTAGGTCCACAAAATACACGGTTGCCACTTTCTTGCCAAAGTCACTGTTTGAGCAGTTTAGGAGGGTGGCTAATTTCTATTTCTTGGTGGCTGGCATCTTGGCCTTCACAAAGCTTACTCCTTATACTGCTGTCAGTGCTATTCTTCCACTCTCTATCATCATTGGGGCAACTATGGTGAAAGAGGGTATTGAAGACTGGCGCAGGAAAAAGCAGGATATTGAGGTGAACAATAGAAGAGTTATATTGCACAAAGGTGATGGCATTTTTGAATATACTGAATGGAAGAATCTGAGAGTAGGGAATATAGTGAAGATAATGAAGGATGAATTCTTCCCTGCTGACCTCCTACTGCTTTCATCCAGTTATGAGGATGCAGTCTGCTATGTCGAGACCATGAACTTGGATGGCGAAACAAATTTGAAGTTAAAACAAGGATTGGATGTAACTTCTTCCTTACAGGAGGACTTCAAAATCCGTGATTTTAGAGCTGTCATCAAATGTGAAGACCCAAATGCAAATCTGTATTCGTTTGTTGGGAGCATGGAGTTTGAAGAGCAAAAGTATCCTCTTTCTGCTCAGCAACTTCTTCTGAGAGACTCCAAACTTCGCAATACAGACTATGTGTTTGGAGCAGTCATCTTTACTGGTCATGACACAAAGGTTATTCAAAACTCCACTGATCCTCCTTCGAAAAGAAGCAAAATTGAGAAGAAGATGGATAAGATTATCTACTTCTTGTTTTGTGTTTTATTTCTAATTGCATTTGTGGGATCTATTCTCTTTGGCATCACAACCAAAGGTGACCTGGACAATGGGTTAATGAAAAGATGGTATCTAAGACCAGATAGTTCCACAATTTTCTTTGATCCAGAAAGAGCTGCTGCAGCTGCTATATTTCATTCTTTAACAGCCTTAATGTTATACAATTTCTTTATTCCAATCTCACTGTATTTCTCAATAGAGATTGTCAAAGTCCTTCAGAGCATCTTCATCAATCGAGATATCTTCATGTACTGTGAAGAAGCAGACAAACCAGCTCGTGCCCGAACTTCAAACTTGAATGAGGAACTAGGCCAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCAATGGAGTTCATCAAATGTTCTGTTGCCGGAGTTGCTTATGGTCGTGGTGTAACAGAGGTTGAACAAGCCATGGGAAGAAGTAATGGTTTATCTATTCTTCATGAGCATATTAATGGTCAAAAATCAAAATCTAATGAAATCAGGGACTCTCCTGATAGAAAAGAACCTATCAAAGGTTTTAACTTTACAGATGAAAGGATAATGAATGGAAACTGGGTTAATGAGCCTTCTACAGATGTTATACAGAAATTTTTTCGCTTATTGGCAATTTGTCATACTGCCATACCAGAAGTGGATGAAGAAACAGGAAATGTCTCATATGAGGCTGAATCTCCAGATGAAGCAGCATTTGTGATTGCTGCAAGAGAAGTTGGTTTTAAATTCTACAAAAGGACCCAGACTTGTTTGTCAATGTATGAGTTGGATACTGTTTCTGGCAATGAAGTTGAAAGGACATACAAGCTTCTCAATGTTTTAGAGTTTAGTAGCTCAAGGAAGCGAATGTCAGTGATAGTGAAAGATGAAGAGGGGAGAATTTTTCTACTCTCTAAAGGTGCTGACAGTGTCATGTTTGAAAGGCTTGCCAACAATGGGAGGATGTTTGAAGAGAAAACTCTGGAACACGTGCATGAATATGCTGATGCAGGTCTAAGGACCCTAATACTTTCTTATCGTGAACTTGATGAAGAAGAATACAAAGAGTTTGATGATAAATTTTCTGAAGTAAAAAATTCAGTTGCTGAAGACCGGGAAACACTGATTGAAGAAGTATTAGATAGGATTGAGAGGAATCTAATCCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAAATGGGGTTCCTGATTGTATCGACAAGCTTGCCCAAGCTAAGATTAAGATTTGGGTTTTGACTGGAGATAAAATGGAGACTGCCATCAATATTGGTTTCTCTTGTCGCTTGCTTAGACAAGGAATGAAACAAATTATAATTCATTTGGAGATTCCAGAAATTCAAGCATTAGAAAAGGTTGGAGACAAGATGGCTATTGCCAAGGCATCAAGGGAAAGTGTGCATCATCAGATATCTGAAGGTGCTCAACTGCTTTTTGCATCCAAAGGGACCTGCCAGCAGACATTTGCTCTGATAATTGATGGAAAATCACTTACTTATGCTCTAGAGGATAATATGAAAAACATGTTTCTAGAGCTTGCAAGTCATTGTGCATCTGTTATCTGCTGTCGCTCATCGCCAAAGCAGAAGGCTCTGGTTACTAGACTGGTCAAATCTGGAACTGGTAAAACAACGTTAGCTATTGGTGATGGAGCTAATGATGTCGGAATGCTTCAAGAAGCAGATGTAGGGATTGGAATCAGTGGTGTCGAAGGAATGCAGGCCGTTATGTCTAGTGATATTGCAATTGCACAGTTCCAGTATTTGGAAAGATTACTTCTTGTACATGGACATTGGTGTTACCGGAGGATGTCATCAATGATATGCTATTTCTTCTATAAGAATATCACATTCGGATTCACCCTATTCTTGTATGAGGTGCATGCATCATTCTCTGGACAGCCTGCATACAATGACTGGTTTTTGTCTCTCTATAGTGTCTTCTTTTCGTCACTTCCTGTAATTGCCCTTGGGGTCCTTGACCAAGATGTATCTGCCAGGTACTGCCTAAAGTTTCCTATCTTATACCAAGAAGGTGTGCAAAATGTGCTCTTTAGCTGGCGTATGGTACTTAGTTGGATGCTTAATGGATTTATTAGTGCCACAATGATATTCTTCTTCTGCACCAAAGCAATTGAGCCTCAGGCCTTTGATGAGGAGGGAAGAACCGCCGGAAGGGATATGCTGGCCGTGACAATGTATACCTGCGTGGTTTGGGTTGTGAACTTGCAGATGGCACTTGCTATACGTTACTTTACCTTGATACAACATATTTTTATCTGGGGTTCCATTGCTTTCTGGTATCTTTTCCTCCTGGCATATGGAGCAATGCCTCCAAAATTTTCTACAAATGTTTACAAAGTCTTCATTGAAACTCTGGCCACGTGTCCTTCCTTTTGGGCTGTGACATTCTTTGTGGCGATCTCAACACTTGTACCATACTTCACATTCTCAGTAATTCAGATGTGGTTCTTCCCCATGTATCACCAAATTGTACAATGGATAAGGTATGAGAGGAAGACAAATGGCTCTGAATAA 3507 0.4023 MRGGRRRSMIKLKFSKIYSFACGKTTLKREHSRIGGHGHSRVVFCNEPDRFEGGVFNYADNSVRSTKYTVATFLPKSLFEQFRRVANFYFLVAGILAFTKLTPYTAVSAILPLSIIIGATMVKEGIEDWRRKKQDIEVNNRRVILHKGDGIFEYTEWKNLRVGNIVKIMKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLDVTSSLQEDFKIRDFRAVIKCEDPNANLYSFVGSMEFEEQKYPLSAQQLLLRDSKLRNTDYVFGAVIFTGHDTKVIQNSTDPPSKRSKIEKKMDKIIYFLFCVLFLIAFVGSILFGITTKGDLDNGLMKRWYLRPDSSTIFFDPERAAAAAIFHSLTALMLYNFFIPISLYFSIEIVKVLQSIFINRDIFMYCEEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGVAYGRGVTEVEQAMGRSNGLSILHEHINGQKSKSNEIRDSPDRKEPIKGFNFTDERIMNGNWVNEPSTDVIQKFFRLLAICHTAIPEVDEETGNVSYEAESPDEAAFVIAAREVGFKFYKRTQTCLSMYELDTVSGNEVERTYKLLNVLEFSSSRKRMSVIVKDEEGRIFLLSKGADSVMFERLANNGRMFEEKTLEHVHEYADAGLRTLILSYRELDEEEYKEFDDKFSEVKNSVAEDRETLIEEVLDRIERNLILLGATAVEDKLQNGVPDCIDKLAQAKIKIWVLTGDKMETAINIGFSCRLLRQGMKQIIIHLEIPEIQALEKVGDKMAIAKASRESVHHQISEGAQLLFASKGTCQQTFALIIDGKSLTYALEDNMKNMFLELASHCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADVGIGISGVEGMQAVMSSDIAIAQFQYLERLLLVHGHWCYRRMSSMICYFFYKNITFGFTLFLYEVHASFSGQPAYNDWFLSLYSVFFSSLPVIALGVLDQDVSARYCLKFPILYQEGVQNVLFSWRMVLSWMLNGFISATMIFFFCTKAIEPQAFDEEGRTAGRDMLAVTMYTCVVWVVNLQMALAIRYFTLIQHIFIWGSIAFWYLFLLAYGAMPPKFSTNVYKVFIETLATCPSFWAVTFFVAISTLVPYFTFSVIQMWFFPMYHQIVQWIRYERKTNGSE* 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00710 1168 Gene3D - 546 680 IPR023299 GO:0000166
Lapu9g00710 1168 FunFam Phospholipid-transporting ATPase 119 289 - -
Lapu9g00710 1168 Gene3D - 702 911 IPR023214 -
Lapu9g00710 1168 PRINTS P-type cation-transporting ATPase superfamily signature 871 890 - -
Lapu9g00710 1168 PRINTS P-type cation-transporting ATPase superfamily signature 427 441 - -
Lapu9g00710 1168 FunFam Phospholipid-transporting ATPase 548 706 - -
Lapu9g00710 1168 Pfam Cation transport ATPase (P-type) 538 631 - -
Lapu9g00710 1168 CDD P-type_ATPase_APLT_Dnf-like 60 1031 - -
Lapu9g00710 1168 ProSitePatterns E1-E2 ATPases phosphorylation site. 429 435 IPR018303 -
Lapu9g00710 1168 SFLD C1.7: P-type atpase like 411 922 - -
Lapu9g00710 1168 SUPERFAMILY Calcium ATPase, transmembrane domain M 58 1149 IPR023298 -
Lapu9g00710 1168 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 499 707 IPR023299 GO:0000166
Lapu9g00710 1168 Gene3D - 114 290 - -
Lapu9g00710 1168 Pfam Phospholipid-translocating ATPase N-terminal 44 109 IPR032631 -
Lapu9g00710 1168 FunFam Phospholipid-transporting ATPase 706 911 - -
Lapu9g00710 1168 NCBIfam HAD-IC family P-type ATPase 843 950 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu9g00710 1168 Pfam Phospholipid-translocating P-type ATPase C-terminal 899 1149 IPR032630 -
Lapu9g00710 1168 NCBIfam phospholipid-translocating P-type ATPase 58 1156 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lapu9g00710 1168 SUPERFAMILY Calcium ATPase, transduction domain A 145 286 IPR008250 -
Lapu9g00710 1168 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 40 1160 - -
Lapu9g00710 1168 SFLD p-type atpase 411 922 IPR044492 -
Lapu9g00710 1168 SUPERFAMILY HAD-like 422 926 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00710 Lapu-Chr9 8920313 8930783 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00710 3 1168 Primary Pumps ATPases AT1G68710 70.844 0.0 1780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00710 K01530 - gmx:100798329 2149.4