Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00698 ATGGTGCTTTTGGGTCTTCTCTTGCTGGGATTTCTTTCTCTGGCTTCGTCTGTCTCTGCTGGTTGGATGAGTGCTCATGCAACCTTCTATGGAGGGGGTGATGCCTCAGGCACTATGGGGTTGTCTGTGACAATGGTTTTGTGGTTTGTTGGTGCAGGTGGAGCATGTGGATATGGGAACTTGTATAGCCAGGGTTATGGAACAAACAGTGCTGCTTTGAGCACAGCTTTGTTCAACAATGGTTTAAGCTGTGGAGCATGTTTCGAGATTAGGTGTGTTGATGACAATAGATGGTGTCTTCCACGCTCAGTTGTGGTCACTGCAACCAATTTCTGTCCCCCAAACAATGCCCTACCAAGTACTGCAGGAGGATGGTGCAACCCTCCTCTTCACCATTTCGACCTTTCCCAACCTGTCTTCCAACAAATTGCTCAATACAGAGCTGGAATAGTACCTGTTGCTTACAGAAGGGTCCCTTGCCAAAAGAGAGGGGGCATCAGATTCACCATCAACGGCCACTCATACTTCAACCTAGTCCTAATCACCAACGTTGGAGGTGCTGGTGATGTTCATGCAGTTTCCATCAAAGGTTCAAAAACAAATTGGCAACCTATGACCAGAAACTGGGGTCAGAACTGGCAAAGCAACACTTACCTGAATGGACAAAGCCTCTCTTTTAAGGTTACCACTAGCGACGGACGCACTGTGGTCTCTTATAATGTTGCACCCACAAGTTGGTCCTTTGGCCAAACCTTCAATGGCCACCAATTCATCTAA 777 0.4736 MVLLGLLLLGFLSLASSVSAGWMSAHATFYGGGDASGTMGLSVTMVLWFVGAGGACGYGNLYSQGYGTNSAALSTALFNNGLSCGACFEIRCVDDNRWCLPRSVVVTATNFCPPNNALPSTAGGWCNPPLHHFDLSQPVFQQIAQYRAGIVPVAYRRVPCQKRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSKTNWQPMTRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVVSYNVAPTSWSFGQTFNGHQFI* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00698 258 PANTHER EXPANSIN-A15 13 257 IPR002963 GO:0009664
Lapu9g00698 258 FunFam Expansin 13 161 - -
Lapu9g00698 258 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 53 165 IPR007112 -
Lapu9g00698 258 CDD DPBB_EXPA_N 21 160 - -
Lapu9g00698 258 SUPERFAMILY PHL pollen allergen 162 253 IPR036749 -
Lapu9g00698 258 PRINTS Expansin/Lol pI family signature 202 216 IPR007118 GO:0005576
Lapu9g00698 258 PRINTS Expansin/Lol pI family signature 21 36 IPR007118 GO:0005576
Lapu9g00698 258 PRINTS Expansin/Lol pI family signature 240 254 IPR007118 GO:0005576
Lapu9g00698 258 PRINTS Expansin/Lol pI family signature 148 164 IPR007118 GO:0005576
Lapu9g00698 258 SMART dpbb_1 70 155 IPR007112 -
Lapu9g00698 258 SUPERFAMILY Barwin-like endoglucanases 11 183 IPR036908 -
Lapu9g00698 258 Gene3D - 165 257 IPR036749 -
Lapu9g00698 258 PRINTS Expansin signature 104 114 IPR002963 GO:0009664
Lapu9g00698 258 PRINTS Expansin signature 164 176 IPR002963 GO:0009664
Lapu9g00698 258 PRINTS Expansin signature 211 232 IPR002963 GO:0009664
Lapu9g00698 258 PRINTS Expansin signature 65 79 IPR002963 GO:0009664
Lapu9g00698 258 PRINTS Expansin signature 92 103 IPR002963 GO:0009664
Lapu9g00698 258 PRINTS Expansin signature 123 140 IPR002963 GO:0009664
Lapu9g00698 258 PRINTS Expansin signature 240 256 IPR002963 GO:0009664
Lapu9g00698 258 PRINTS Expansin signature 140 153 IPR002963 GO:0009664
Lapu9g00698 258 PRINTS Expansin signature 176 197 IPR002963 GO:0009664
Lapu9g00698 258 Pfam Lytic transglycolase 71 155 IPR009009 -
Lapu9g00698 258 Gene3D - 11 161 IPR036908 -
Lapu9g00698 258 Pfam Expansin C-terminal domain 166 243 IPR007117 -
Lapu9g00698 258 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 175 254 IPR007117 -
Lapu9g00698 258 FunFam Expansin 165 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00698 Lapu-Chr9 8642020 8644450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00698 1 257 Expansin Gene Family AT2G03090 75.000 5.67e-145 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00698 - K20628 gmx:100802401 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00698 9 8642020 8644450 Lapu9g00698 9 8642020 8644450 ECH