Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00697 ATGTGTAAAGTGTTCACGGCTAAGGAGGGCCATGAGGTTGGCACCAGCGTTGGGGTTGGAGGGCGGAGGGATGGGCTGGGTGGGGAAGGAGAGGGAACGGTTGTGGTGGAGAGGGAGGTCGAAGGCGGGGAAGTGAAAGGGCGCGTTGGCGGAGAAGGGCGGAGGATCACCACTCAAATTACACCAATTGATGTCAGTTCTGTGGAGCCTCGCAACCATGGCCTCCAAACTTCCATCATAGCCTCTCTGCCTAAACTGTTCTACAACCAAACCGAACAGTTCAAGCAAGGCCAAGTCATAGAGTGTTCAGTTTGCCTAGGCACCATTATGGAGGATGCAATTACTAGACTGCTACCAAATTGTAAGCACATTTTTCATGCTGATTGTGTTGATAAATGGTTTAATTCCAACACCACGTGCCCAATTTGCCGCACTGTGGCTGACCCAAAGGTGCAAGCAGAAGAACAGGGTCATTTAGCCACAAGGGTCCACCACCAAGTCCAGCCCACAACACCACTTGTTGTGGGTGGTGATGAGCTACAAGATGGTGGTGAAATGGAGAAGGTGGGGTGTTCAGGTTTGAGAATAGGATCTTTCCATAGGATGGTTACTAACAGGGAAGGATCACGGAGGACTCATAGTTGTGATGAATCTACCATAGATATAGGAAGACACTGA 678 0.5015 MCKVFTAKEGHEVGTSVGVGGRRDGLGGEGEGTVVVEREVEGGEVKGRVGGEGRRITTQITPIDVSSVEPRNHGLQTSIIASLPKLFYNQTEQFKQGQVIECSVCLGTIMEDAITRLLPNCKHIFHADCVDKWFNSNTTCPICRTVADPKVQAEEQGHLATRVHHQVQPTTPLVVGGDELQDGGEMEKVGCSGLRIGSFHRMVTNREGSRRTHSCDESTIDIGRH* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00697 225 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 64 154 - -
Lapu9g00697 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 149 IPR013083 -
Lapu9g00697 225 Pfam Ring finger domain 101 144 IPR001841 -
Lapu9g00697 225 SUPERFAMILY RING/U-box 89 154 - -
Lapu9g00697 225 ProSiteProfiles Zinc finger RING-type profile. 102 144 IPR001841 -
Lapu9g00697 225 SMART ring_2 102 143 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00697 Lapu-Chr9 8630138 8632259 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00697 74 225 C3H Transcription Factor Family AT2G42360 34.810 2.22e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00697 K19038 - gmx:100786701 265.388