Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00693 ATGTTAACAAGAAAAACCGTTTCTCAATACTTCTACATGCCAATATCACAAGCCGCTAAAAAGCTCAATGTTGGTCTCACACACTTGAAGAAAAGGTGTAGGGAATTAGGTATTCGAAGGTGGCCACATAGGAAGCTAATGAGTCTTCAAACCCTTATAAAGAATATGCAAGAGCAAGGAGAGGGTGAGGGGCCTGAAAATGATGAAAAAATAAGGAGTGCCATTGAGATGTTGGAGAAAGAAAAAAGCATGGTGGAGGAAATGCCAGATTTGGAACTAGAAGATAAAACAAGAAGGCTTAGACAAGCTTGTTTCAAGGCTAACTACAAGAAGAGGAAACTCATGAGCATGGGGTTTATGCAACCCCAATCTTCC 375 0.4053 MLTRKTVSQYFYMPISQAAKKLNVGLTHLKKRCRELGIRRWPHRKLMSLQTLIKNMQEQGEGEGPENDEKIRSAIEMLEKEKSMVEEMPDLELEDKTRRLRQACFKANYKKRKLMSMGFMQPQSS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00693 125 ProSiteProfiles RWP-RK domain profile. 1 70 IPR003035 -
Lapu9g00693 125 PANTHER PROTEIN RKD4 1 123 IPR044607 GO:0003700
Lapu9g00693 125 Pfam RWP-RK domain 2 49 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00693 Lapu-Chr9 8538038 8538706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00693 2 118 AtRKD Transcription Factor Family AT1G18790 64.103 9.58e-53 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lapu9g00693 RWP-RK 7.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00693 - - pvu:PHAVU_009G186900g 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00693 9 8538038 8538706 Lapu9g00693 9 8538038 8538706 ECH
Lapu3g01026 3 10973291 10974520 Lapu9g00693 9 8538038 8538706 PCT