Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00686 ATGGGAAGACCACCTTGCTGTGACAAAATTGGGATTAAGAAAGGGCCGTGGACTCCCGAGGAAGACATCATCTTGGTCTCTTACATTCAAGAGCATGGACCCGGGAATTGGAGATTGGTTCCCTCTAATACAGGGTTGATGAGATGCAGCAAAAGCTGCAGACTCAGATGGACCAACTATCTCCGACCTGGAATCAAACGAGGCAATTTCACCGATCATGAAGAGAAAATGATAATCCACCTTCAAGCCCTTTTGGGTAACAGATGGGCTGCAATAGCCTCCTACCTTCCACAGAGGACAGACAATGACATAAAGAACTATTGGAATACCCATTTGAAGAAGAAGCTGAAGAAGATGCAAAGTGAGGGTGATGATGACGGTAATAATTATGACAAGGGAAACTCTTGTTCACAGCTAAAGGGTCAATGGGAGAGAAGGCTTCAAACAGATATCCACATGGCCAAACAAGCCTTATGTGAGGCTTTGTCCCTTGACAAACCATCCCAAATTTTCCCTGAGACCAAATTACCCTCCACTTCTTCTAAATGCTTCCATGATCACCACCACCACCACCACCCCACATCGCCAAACCAAACATCCTTGTACGCCTCAAGCACAGAAAACATAGCCAGGTTGCTGGACAATTGGATGAAGAAATCCCCAAACAAAACCCAAACAAACTACTCCATCAGCGACATGGTAACCACAGGGTCCAGTTCCAGTGAGGGAACACAAAGCACCGTCACATGCACCACGCAGGACCATCTTGACTCCTTGTGGAGCTTCAAGTCTGAACGTTCACACTCTGTGTCAGCAGAAGAAAACACCAACTTGGTCGACAGCAAGCCGAACCAAGAGACGCAAGTCCCCCTCATGCTGCTCGAGAATTGGCTTTTTGATGATTGTGCACCTCAGTGCAACGAAGATCTCATGAACATGTCACTAGAGGAAAGTACAGATGGGTTGTTCTAG 972 0.4671 MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRLVPSNTGLMRCSKSCRLRWTNYLRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKMQSEGDDDGNNYDKGNSCSQLKGQWERRLQTDIHMAKQALCEALSLDKPSQIFPETKLPSTSSKCFHDHHHHHHPTSPNQTSLYASSTENIARLLDNWMKKSPNKTQTNYSISDMVTTGSSSSEGTQSTVTCTTQDHLDSLWSFKSERSHSVSAEENTNLVDSKPNQETQVPLMLLENWLFDDCAPQCNEDLMNMSLEESTDGLF* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00686 323 MobiDBLite consensus disorder prediction 176 201 - -
Lapu9g00686 323 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 253 - -
Lapu9g00686 323 CDD SANT 69 112 IPR001005 -
Lapu9g00686 323 Gene3D - 69 135 - -
Lapu9g00686 323 CDD SANT 16 61 IPR001005 -
Lapu9g00686 323 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lapu9g00686 323 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lapu9g00686 323 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lapu9g00686 323 SMART sant 66 114 IPR001005 -
Lapu9g00686 323 SMART sant 13 63 IPR001005 -
Lapu9g00686 323 FunFam Transcription factor MYB30 68 126 - -
Lapu9g00686 323 FunFam MYB-related transcription factor 13 66 - -
Lapu9g00686 323 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lapu9g00686 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Lapu9g00686 323 Gene3D - 13 66 - -
Lapu9g00686 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Lapu9g00686 323 MobiDBLite consensus disorder prediction 224 248 - -
Lapu9g00686 323 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00686 Lapu-Chr9 8408705 8410597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00686 1 323 MYB Transcription Factor Family AT5G62470 52.500 3.41e-111 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lapu9g00686 Myb_DNA-binding 7.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00686 K09422 - gmx:100807020 539.65