Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00680 ATGGAGGGAGGTGATGATTTCCACCACCACCACCACCACCATCACCACCACCGACAGAACTTCCCATTCCAACTCCTCGAGAAGAAAGAAGACCAAGACCCCTCTTCTTGCTCCACTTCCTCCCCATACCCTTCCCTAGCCATCTCAGCCGAACCCTCCACCTCCAACTCAACCCGATCCAACAACAACACCACCCTCCTCCCCACACCCTCTGATGCCTCCCCCAAAAAGCCACCTCCCAAAAGAACCTCCACCAAAGACCGCCACACCAAAGTCGACGGACGCGGTCGTCGAATTCGAATGCCTGCTCTCTGCGCCGCCAGAGTGTTCCAGCTCACGCGGGAGCTGGGACACAAGTCTGACGGTGAGACCATAGAGTGGCTCCTCCAGCAGGCGGAGCCGGCCGTCATCGCAGCCACCGGCACCGGCACCATCCCCGCTAACTTCACATCCCTTAACATATCTCTCCGGAGCTCAGGCTCTTCCATGTCCGTCCCTTCCCAGCTGCGATCCAACTACTTCAATTCAAACTTTTCTCTCCAACCCCGCAGAAGCCTATTCCTTGAAAACTCCAATACTTCCACCACACTCCTCAATTTTCAATCCAACAACCCCATCTCCACTTCCATGTTCCAACCCAAGCACGAATTACGCGATTCATCATCCCTTGACTTGTCCTCGGAGAACAACGACGAGGGTTTGGGAAGGAAAAGACGACCCTCGGAGCAAGACCTATCCTCAACCATGCAGCACCAAGTTGGAAGCTATTTGATGCAATCAAGCACCTCAGGGACAATTCCGGCGAGCCATGCTCAAATTCCGGCGAATATATGGATGCTAGCGAATTCCAATAGCCAAGGTGTGAGTGGTGAAGCTCCTTTGTGGACATTCCCCGGTGTGAGTAACAGTGCTTTGTATAGAGGAAACATGTCAAGCGGGTTGCATTTCATGAACTTTCCTACACCTATGGCCCTTTTACCAGGTCAACAATTAGGGTCTTCCGGGATTGGTGGGAACATCAACGAAGGGCATTTGAGCATGCTTTCGGGGCTTAACCCTTACCGGACGGTGATCGGCGTTTCGGAATCTCAGGCGAGTGAGTCACAGTCACATCACGGGGGAAGCGAAGATCGGCATGATGATAATTAA 1149 0.5318 MEGGDDFHHHHHHHHHHRQNFPFQLLEKKEDQDPSSCSTSSPYPSLAISAEPSTSNSTRSNNNTTLLPTPSDASPKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSNYFNSNFSLQPRRSLFLENSNTSTTLLNFQSNNPISTSMFQPKHELRDSSSLDLSSENNDEGLGRKRRPSEQDLSSTMQHQVGSYLMQSSTSGTIPASHAQIPANIWMLANSNSQGVSGEAPLWTFPGVSNSALYRGNMSSGLHFMNFPTPMALLPGQQLGSSGIGGNINEGHLSMLSGLNPYRTVIGVSESQASESQSHHGGSEDRHDDN* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00680 382 MobiDBLite consensus disorder prediction 199 216 - -
Lapu9g00680 382 ProSiteProfiles TCP domain profile. 85 139 IPR017887 -
Lapu9g00680 382 MobiDBLite consensus disorder prediction 230 244 - -
Lapu9g00680 382 MobiDBLite consensus disorder prediction 79 98 - -
Lapu9g00680 382 MobiDBLite consensus disorder prediction 35 71 - -
Lapu9g00680 382 MobiDBLite consensus disorder prediction 362 382 - -
Lapu9g00680 382 MobiDBLite consensus disorder prediction 1 98 - -
Lapu9g00680 382 MobiDBLite consensus disorder prediction 20 34 - -
Lapu9g00680 382 Pfam TCP family transcription factor 83 248 IPR017887 -
Lapu9g00680 382 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 26 372 IPR005333 GO:0003700
Lapu9g00680 382 MobiDBLite consensus disorder prediction 199 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00680 Lapu-Chr9 8283646 8284794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00680 73 381 TCP Transcription Factor Family AT3G47620 41.728 7.12e-63 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lapu9g00680 TCP 5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00680 - - gmx:100809154 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00680 9 8283646 8284794 Lapu9g00680 9 8283646 8284794 ECH