Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00674 ATGGCAGAGTGGAGGAAGTTCAAACTTTTAGGAAAGGGTTCATACGCTGAGGTGTATCTTGCTACTATCATTCTTCCAAAATCTCATAATAGGAAGGTTGTAGCTGTGAAGTGTTCAACTCCTTTTTCATTTTCCATTACTTCCCTTGAGAAGGAGAGAAAAATATTAGAATTATTCATAGATCGTAAAGAAATTCTTCAATGCTATTTCTATCAGTATAGCATTGAGAGAGGTTTTCTCACTTATAATCTTTTCATGGAATTTGCTCCTTATGGTTCTTTTCATGATTTAATAAGAAAGGGACCCCTCTTGGAGAAGGAAGTGATAACATATACTTATATGCTTCTCAAGGGTCTTTCTTGTATTCATGGAAAAGGAGTTATTCATTGTGACCTCAAACCAGACAACATTCTTCTTTTTCCTTCATCTGATGGTCATACAAAGTATCAACTAAAGATTGCTGATTTTGGATTGTCCAGAACCAGAGAGGAGACAAACACTGACTTGGGGGATATCAAGTTTAGAGGGACACCTTTCTACATGTCTCCAGAATCGATGTTGGGTCTTATAGAAACACCCTTAGATATATGGTCTCTTGGCTGCATTGTTATTGAGATGATCACTGGATTCCCACCTTGGTCGAACCTACAAACCAAAGAGGAACTAATGCAAAAACTTGCATTCCTTCGAGAAACACCAAAGATACCTAATGGACTTGATTGGGATTGCGAAAACTTCTTAAGCAAATGTTTTGTGAAGGATCCTAAACAGAGATGGACTGCTGCCATGCTTCTCGAACACCCTTTTATTCAAAAAGAATATCCCACATCTAGATTTAATTCTTTATCTTTTTTTTCATATGATATTATTATGTCATACCAGTTGGATCTATTTTGTCCTTCGGTTGGGTAA 912 0.3673 MAEWRKFKLLGKGSYAEVYLATIILPKSHNRKVVAVKCSTPFSFSITSLEKERKILELFIDRKEILQCYFYQYSIERGFLTYNLFMEFAPYGSFHDLIRKGPLLEKEVITYTYMLLKGLSCIHGKGVIHCDLKPDNILLFPSSDGHTKYQLKIADFGLSRTREETNTDLGDIKFRGTPFYMSPESMLGLIETPLDIWSLGCIVIEMITGFPPWSNLQTKEELMQKLAFLRETPKIPNGLDWDCENFLSKCFVKDPKQRWTAAMLLEHPFIQKEYPTSRFNSLSFFSYDIIMSYQLDLFCPSVG* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00674 303 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 280 - -
Lapu9g00674 303 ProSiteProfiles Protein kinase domain profile. 4 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00674 303 CDD STKc_MAPKKK 3 270 - -
Lapu9g00674 303 SMART serkin_6 4 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00674 303 ProSitePatterns Protein kinases ATP-binding region signature. 10 37 IPR017441 GO:0005524
Lapu9g00674 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Lapu9g00674 303 SUPERFAMILY Protein kinase-like (PK-like) 3 284 IPR011009 -
Lapu9g00674 303 Pfam Protein kinase domain 5 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00674 303 Gene3D Transferase(Phosphotransferase) domain 1 1 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00674 Lapu-Chr9 8190436 8192717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00674 3 270 MAP Kinase Kinase Kinase AT4G36950 38.768 1.28e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lapu9g00674 Pkinase 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00674 - - gmx:102664043 420.239