Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00673 ATGGATTCTCTGAAAATGTTCAAAGGTTACGGCAAAATAGAACGCCATCAGCACCGAATCGAAAATGAACAACGAAACCCTAAATCCCCAATCTCAAAACCCTTAATCGCAACTACAATTTCCGTCTTCGCAATCCTCTTCCTCACCCTAACCTTCGCCTTCGCTCTCGCATCCATCGTTCACCACCGCACCACTGAGTCACAACAGCTTCTCAACTCGGCCGAGTCCATACGAGTCGTCTGCAATGTCACGCGCTTCCCCGACGCGTGCCTCGCCGCCATCCCGCCCTCCGCCAACGCCACCGATCCCCAAACCATCCTCGCCCTCTCGCTCCGCGCGTCTCTTCGTGAGGTCCAGAGCCTCGCGTCCTCGCTTAGGGCAACGAAGGGAGGTGCGCTTGCCGACTGCAAGGACCAGTTTGACGACGCGCTGAGTCGACTCAACAACTCGCTGTCGGCCTCGGCGGCGCTGAGCGGTACGACGGTGGGCGATGTGCAGACATGGGTGAGCGCGGCGGTGACGGACCAGCAGACATGCCTGGACGGACTGGAAGAGGCGGGTGACGTGGCGGAGCTTGAGAAGATGAAGAAAATGATGGAGAGGTCGAACGAGTATGTCAGTAACAGTTTGGCTATTGTGGCTAATATTCGTAATTTGTTTCGCCACTTTAACATGACGCTCCATTGA 687 0.559 MDSLKMFKGYGKIERHQHRIENEQRNPKSPISKPLIATTISVFAILFLTLTFAFALASIVHHRTTESQQLLNSAESIRVVCNVTRFPDACLAAIPPSANATDPQTILALSLRASLREVQSLASSLRATKGGALADCKDQFDDALSRLNNSLSASAALSGTTVGDVQTWVSAAVTDQQTCLDGLEEAGDVAELEKMKKMMERSNEYVSNSLAIVANIRNLFRHFNMTLH* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00673 228 PANTHER PECTINESTERASE INHIBITOR-LIKE 46 212 - -
Lapu9g00673 228 Pfam Plant invertase/pectin methylesterase inhibitor 76 212 IPR006501 GO:0004857
Lapu9g00673 228 NCBIfam pectinesterase inhibitor domain 48 215 IPR006501 GO:0004857
Lapu9g00673 228 Gene3D Invertase/pectin methylesterase inhibitor family protein 72 218 IPR035513 -
Lapu9g00673 228 SMART PMEI_2 72 212 IPR006501 GO:0004857
Lapu9g00673 228 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 216 IPR035513 -
Lapu9g00673 228 CDD PMEI-like_3 80 216 - -
Lapu9g00673 228 FunFam Pectinesterase 73 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00673 Lapu-Chr9 8185035 8185721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00673 1 228 Carbohydrate Esterase AT1G53840 32.812 6.29e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00673 - - gmx:100789567 283.493