Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00672 ATGTCTAGCCAGGGATTTTCCAGAACTTCAAAATTCGCAGAAAGTGGGACTAATGATCTGATTTTGAGGCTACAAGCACTGCTGCCACAACTAAACCAAACAAGCGACTCAAGGGCATCAGTGAGCATGACGCAGATCATAAAGGAAACTTGCTCTCACATCAATAGGCTTCAGAAAGAGGTAAAAGAGCTTGGTGAAAGGCTAGCAGAGTTAGTGGATTCTGCATACATTAGTGATGTTGACGAAGATCGTCTTAGAAGACTTCTACAACAATAA 276 0.4203 MSSQGFSRTSKFAESGTNDLILRLQALLPQLNQTSDSRASVSMTQIIKETCSHINRLQKEVKELGERLAELVDSAYISDVDEDRLRRLLQQ* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00672 91 Coils Coil 47 74 - -
Lapu9g00672 91 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 17 62 IPR036638 GO:0046983
Lapu9g00672 91 PANTHER DNA BINDING PROTEIN 7 91 IPR044172 -
Lapu9g00672 91 Gene3D - 15 90 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00672 Lapu-Chr9 8171042 8171663 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00672 12 72 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G74500 46.032 1.69e-11 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00672 - - gmx:100810266 122.094