Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00666 ATGACGACGACCACTCTCACCGGTTTGCCATTGGTGTTGCAACAATTCACAGCTCTGTTGAAGAAGAATCTGTTACTGTCATGGCGGAACAAGAGAGCCAGCCTTCTGCAACTGCTCTCCCCTCTCATATTCATTTTCCTCATATTCGCCATCGACAAGGCGATTAAGGCGCAGACCTCAACCTCCTCCGCCTACAAGACCGTCACCGACCCTCCCACCCAACCCTCTCCCTCCATAACTCCCTGCGAAGACAAGTTCTTCATCAAACTCCCCTGCTACGACTTCGTTTGGAGCGGTGACCAAAACCCCACCTTCCAAACCATCGTCACTCGCATCATGAACAACAACCCCGGCAGACCCATCCCTCCCTCCAAGGTGAAGTCCTTTAAGGACAAGACTGAAGTGGATGCGTGGCTGTTCAGTAACCCCATGCGTTGTCCAGGGGCGCTTCATTTCTCGCAGCCAAACGACACCGTTATAAGCTACGGTCTTCAGACCAACTCCACCAGTCTTCAGAGGCGAGGCAAGTATGAGGACCCTACTGCTTCCTTTCAACTTCCTCTTCAGCTTGCCGCCGAGAGGGAAATTGCCAGACACCTTATTGGAGACCCGGGTTTCAGTTGGAATGTGTTTCTGAGGGAATTTGCGCACCCTTCCATGAGTCCTTTCTCTGCCGTGGGTTCAATTGGTCCCGCGTTTTTCCTCGCCATTGCCATGTTTAATTTTGTTCTTCAGATAAGCTCTTTGGTGACGGAGAAAGAGCTTAAACTTCGCCAGGCAATGACTATGATGGGCCTGTACGACTTTGCTTACTGGTCGTCATGGCTCGTTTGGGAGACGGTTGTCACAATCCTATCGTCCCTCCTCATAGTACTCTTTGGAATGATGTTCCAATTCAGTTTTTTCTTGAAAAACAGTTTCGTGGTCCTGTTTGTTTTGTTCTTCCTATTTGAACTTAATATGACTGGCTTGGCCTTCATGTTATCTGCTTTCATTAAGAATTCATCTTCGTCTACGACAATGGGATTCTCTATATTTATTGTGGGCTTTTTGACTCAGCTTGTGGTACTAGGAGGTTTTCCTTACAATGATAGTTTCTCCAAAACTTTACGAGATTTGTGGTCGTTATTCCCACCCAATCCTTTTTCTCAAGGTATACAAGTGCTTTCAGATGCAGTTGCAACTTCTGAAGACAATGGTGTTAGCTGGAGTAGACGAGGAGAATGCGCTCATACTGATGCAGACTGTGTGATAACTATTGATGATATTTATAAATGGCTTGCGGCTACATTCGTTCTCTGGTTTGTTCTGGCCATTTACTTTGACAATATAATCCCAAATGCATCGGGTGTGAGGAAGTCAATATTCTACTTTCTAAATCCCAGTTATTGGATTGGAAAAGGGGGTCAAAAAGTGAAAGAGGGTGGGCTTTGTAGTTGTGTAGGTTCAAACCCACGTCAGGAAATAAGTACACCAGATGACGAAGATGTCCTTGAAGAAGAAAGCAAAGTGAAACAACAACTAACAGAAGGTCTAGTGGATGCAAATGTTGCTGTTCAAATACATGGCCTTGCAAAGACCTATGCCGGTACACGAAACATTGGTTGCTGCTTCAAATGTAAAAAGACTGCTCCTTACACTGCTGTTAAGGGTTTGTGGGTGAACTTTGCAAAGGATCAGTTGTTTTGTCTTCTAGGACCAAATGGGGCTGGAAAAACTACAGCTATTAATTGTTTGACAGGGATAACTCCAGTAACTAACGGAGACGCGTTGATTTATGGACATTCAATCAGAAGTTCTATTGGCATGTCAAACATTCGAAAACTTATAGGAGTATGTCCACAGTTCGATATACTATGGGATGCACTGTCTGGCCAAGAACACCTCCAACTCTTTGCTACCATTAAAGGCCTGTCCCCTGCTTCCATAAAATCAATAACCCAGACTTCATTAGCAGAGGTGAAACTCACGGATGCAGCCAAAGTGAGAGCTGGAAGTTACAGTGGAGGAATGAAACGCCGTCTCAGTGTTGCAATTGCCCTTATTGGTGACCCTAAGTTAGTCATTTTGGATGAACCGACTACTGGTATGGATCCGATAACAAGAAGGCATGTGTGGGACATAATTGAAAATGCAAAAAGAGGGCGCGCCATTGTTCTTACAACGCACTCTATGGAAGAAGCTGACATTCTAAGTGATCGCATAGGAATCATGGCAAAAGGAAGGCTTCGCTGCATTGGCACCTCAATCAGATTGAAATCACGCTTTGGTACTGGTTTTATTGCTAATATCAGCTTCTATGGAAACAATATTGAACGTAGTCCTACCAATGGAGATGCAATATCTACAGAGCATCGTGAGGAAGTGAAGAAATTCTTTAAGAATTATTTAGATGTAGAGCCAAAAGAGGAGACCAATAACTTCGTAACTTTTGTGATTCCCCATGACAGAGAAGCGCTCCTGACAAATTTCTTTTCGGAGCTCCAAGATAGAGAAGAAGAGTTTGGCATTTCTGACATCCAGCTTGGTCTTACAACTCTCGAAGAAGTTTTCTTGAATATTGCTAGACAAGCAGAGCTAGAAAACGCTACAGCTGAAGGGAGACTAATAACCCTGACCTTAACATCTGGGGAATCTGTGCAGATTCCTGTAGGAGCTAGGTTTGTGGGAATTCCAGGAACACAGTCTGGGGAAAACCCAACTGGGTTTATGGTAGAAGTTTACTGGGAGCAAGACGATACTGGGGCTCTATGCATTGCTGGCCACTCGCAGAAGGTTCCTATTCCTCATAGCGTTCAATTATCATCCTCTCCTTCTGCAAGACACCGTAGATCTTTAGGCCGGGCAGGACCAGTTCACGGGTTTGTAATTGATCCAAGTCAAGTCAGTCCAGGTGATTTTCAGTGA 2907 0.4486 MTTTTLTGLPLVLQQFTALLKKNLLLSWRNKRASLLQLLSPLIFIFLIFAIDKAIKAQTSTSSAYKTVTDPPTQPSPSITPCEDKFFIKLPCYDFVWSGDQNPTFQTIVTRIMNNNPGRPIPPSKVKSFKDKTEVDAWLFSNPMRCPGALHFSQPNDTVISYGLQTNSTSLQRRGKYEDPTASFQLPLQLAAEREIARHLIGDPGFSWNVFLREFAHPSMSPFSAVGSIGPAFFLAIAMFNFVLQISSLVTEKELKLRQAMTMMGLYDFAYWSSWLVWETVVTILSSLLIVLFGMMFQFSFFLKNSFVVLFVLFFLFELNMTGLAFMLSAFIKNSSSSTTMGFSIFIVGFLTQLVVLGGFPYNDSFSKTLRDLWSLFPPNPFSQGIQVLSDAVATSEDNGVSWSRRGECAHTDADCVITIDDIYKWLAATFVLWFVLAIYFDNIIPNASGVRKSIFYFLNPSYWIGKGGQKVKEGGLCSCVGSNPRQEISTPDDEDVLEEESKVKQQLTEGLVDANVAVQIHGLAKTYAGTRNIGCCFKCKKTAPYTAVKGLWVNFAKDQLFCLLGPNGAGKTTAINCLTGITPVTNGDALIYGHSIRSSIGMSNIRKLIGVCPQFDILWDALSGQEHLQLFATIKGLSPASIKSITQTSLAEVKLTDAAKVRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIENAKRGRAIVLTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFIANISFYGNNIERSPTNGDAISTEHREEVKKFFKNYLDVEPKEETNNFVTFVIPHDREALLTNFFSELQDREEEFGISDIQLGLTTLEEVFLNIARQAELENATAEGRLITLTLTSGESVQIPVGARFVGIPGTQSGENPTGFMVEVYWEQDDTGALCIAGHSQKVPIPHSVQLSSSPSARHRRSLGRAGPVHGFVIDPSQVSPGDFQ* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00666 968 SMART AAA_5 558 742 IPR003593 GO:0016887
Lapu9g00666 968 FunFam ABC transporter A family member 2 509 773 - -
Lapu9g00666 968 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 494 861 IPR026082 GO:0016020|GO:0055085|GO:0140359
Lapu9g00666 968 CDD ABC_subfamily_A 519 753 - -
Lapu9g00666 968 MobiDBLite consensus disorder prediction 929 968 - -
Lapu9g00666 968 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 519 765 IPR003439 GO:0005524
Lapu9g00666 968 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 545 747 IPR027417 -
Lapu9g00666 968 Gene3D - 513 764 IPR027417 -
Lapu9g00666 968 Pfam ABC-2 family transporter protein 34 440 IPR013525 GO:0016020|GO:0140359
Lapu9g00666 968 Pfam ABC transporter 552 694 IPR003439 GO:0005524
Lapu9g00666 968 ProSitePatterns ABC transporters family signature. 667 681 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00666 Lapu-Chr9 7952468 7958976 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00666 562 764 Calmodulin-binding Proteins AT2G36910 23.944 7.00e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00666 - - gmx:100786538 1699.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00666 9 7952468 7958976 Lapu9g00666 9 7952468 7958976 ECH