Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00665 ATGGGGAAATCACCAGGAAAATGGATCAAAACTGTACTATTTGGAAAAAAGTCATCCAGATCAAATATCTCAAAGGGAAGAGAGCTTGTTAATAAAAGAGAAGCAGTGGTTGCTTCCAACGTGTTGGAAAATGGTTTGGCCTTAGATCCAAACCACAATGAGATTGCTACAAATGTAGAGGACCTTGAACTGGAGAATGAAGAATCAGAAATTATTTTACCTGAGAATCAAGTAAGAGACAGTATGGGGCCGGTTGATCCAGATGCACCACCTGATCCAGAGAAAATCAGGCAGGAGGTAGCAGCAATAAAGGCACAAGCTGCTTTCAGGGGTTACTTGGCTCGCAGGGCATTTAGGGCTCTAAAAGGCATAATAAGGTTGCAAGCACTTATTCGTGGGCACCTAGTTAGGAGACAAGCTGTTGTTACATTATGTTGTATGTATGGGATTGTAAAGTTTCAAGCACTTGCCCGTGGACGAAAGATTAGGAAGTCTAATGTTGGATTTGAAATCCATCAGAAGTGCCGTCTATTTAAGCCTCTGGAGGGCAAACTTGGTGAGCCAGTTAGTATTTCCACAAAAATTTCAAAGTTGTCTGCAAATACTTTCATCCGTAAGCTTCTTGCTTCATCAATTACAATAATGGCCTTGCGCTTGCAATATGTTAGTGGAGATCCAAATTCAGTGTTAAGCTGGTTGGAGCGCTGGTCAGCATCTTACTTTTGGAAACCTGTTCCCCAACCTAAGAAAATTCGGGACACTAAATCTCAGAGAAAGCAGGGTAATATTTCAAATGGAGAAGTTCAAATATCCAAGTCAAGACGCACAAACCGGAAGCTTCCTGTAGCAAGTTTTGAACCAGTCCCCATGCAAACAAATCCTGAATTGGAGAAACCAAAACGTCATTTCAGGAAAGCACCATACCAAGTGTCAGATCCAGAGCAAGACAATCCACAAAGTGAGCTGGAAAAGGTTAAACGTAACTTAAGAAAGATTCATAACCCTGTTGTTGAGAATGCTGTTCATCCAGAAGTTGAATGTGAGACTCTAAAGCAGCATTTGGAAATCACAACAGTTTTTCCAGGGCATGCTGGTACAGAACAAGCGATCATTACTTCTGATGAAAAGATCAAGAAGGAAGAAGCTTTGACTATCTCCAATGTGCCTGATGTTGAAATTAGTCCAAGACAATCAGTTAACAAGGAAGTGACTGACATTCCAAACAGTCATCAAGTGCCTGTAGAATCTAAACCCTTGTCAGAGACCACACCTAAAGATAGAAACACTTCTCGTGATGAAGTTCAAAATGAGCTAGGCAATCTACCGGAGGCAATTTTTAAAGAAGACAACTCCCTATTAACAAATGGAGATTTGAGTCATAAAGATGTGACAGGTAATGAAAACCAGAAACCTACCCGTAAAGCATCGAATTTGACAAAACAGGAGAATGGAGAAGAGGGCTTAAAGAATAGTCCAAAAGTACCAAGTTATATGGCAGCAACTGAATCCGCCAAGGCAAAGTTGAGGGCACTAGGGTCCCCAAGGTTTGGAGAAGATGGAATTGAGAAAAACAACACTGCTGGTTCTGGGAGACATTCTCTGCCATCTTCAACTGGCAACAAGATTATTTCGCATTCACCTAGGACACAGAGATCAGTTCAAGCAGGTGGCAAAGGGAGCAACAAAAGTGACAGATCAACGTCATCTTCTAAAGGAGGGAATGGGAAAGTAATTCAAGCGGAGTGGAGGAGGTGA 1755 0.4171 MGKSPGKWIKTVLFGKKSSRSNISKGRELVNKREAVVASNVLENGLALDPNHNEIATNVEDLELENEESEIILPENQVRDSMGPVDPDAPPDPEKIRQEVAAIKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVVTLCCMYGIVKFQALARGRKIRKSNVGFEIHQKCRLFKPLEGKLGEPVSISTKISKLSANTFIRKLLASSITIMALRLQYVSGDPNSVLSWLERWSASYFWKPVPQPKKIRDTKSQRKQGNISNGEVQISKSRRTNRKLPVASFEPVPMQTNPELEKPKRHFRKAPYQVSDPEQDNPQSELEKVKRNLRKIHNPVVENAVHPEVECETLKQHLEITTVFPGHAGTEQAIITSDEKIKKEEALTISNVPDVEISPRQSVNKEVTDIPNSHQVPVESKPLSETTPKDRNTSRDEVQNELGNLPEAIFKEDNSLLTNGDLSHKDVTGNENQKPTRKASNLTKQENGEEGLKNSPKVPSYMAATESAKAKLRALGSPRFGEDGIEKNNTAGSGRHSLPSSTGNKIISHSPRTQRSVQAGGKGSNKSDRSTSSSKGGNGKVIQAEWRR* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00665 584 Gene3D - 96 143 - -
Lapu9g00665 584 Pfam Protein of unknown function (DUF4005) 481 563 IPR025064 -
Lapu9g00665 584 SMART iq_5 97 119 IPR000048 GO:0005515
Lapu9g00665 584 SMART iq_5 120 141 IPR000048 GO:0005515
Lapu9g00665 584 MobiDBLite consensus disorder prediction 395 418 - -
Lapu9g00665 584 Pfam IQ calmodulin-binding motif 101 119 IPR000048 GO:0005515
Lapu9g00665 584 Pfam IQ calmodulin-binding motif 122 139 IPR000048 GO:0005515
Lapu9g00665 584 MobiDBLite consensus disorder prediction 249 302 - -
Lapu9g00665 584 MobiDBLite consensus disorder prediction 395 433 - -
Lapu9g00665 584 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
Lapu9g00665 584 MobiDBLite consensus disorder prediction 469 485 - -
Lapu9g00665 584 MobiDBLite consensus disorder prediction 258 278 - -
Lapu9g00665 584 MobiDBLite consensus disorder prediction 526 575 - -
Lapu9g00665 584 MobiDBLite consensus disorder prediction 456 584 - -
Lapu9g00665 584 PANTHER IQ-DOMAIN 5-RELATED 1 543 - -
Lapu9g00665 584 ProSiteProfiles IQ motif profile. 122 144 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00665 Lapu-Chr9 7926801 7934648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00665 1 584 IQD Protein Family AT1G74690 43.619 2.67e-122 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00665 - - gmx:100786022 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01469 2 27775127 27780870 Lapu9g00665 9 7926801 7934648 ECH
Lapu9g00665 9 7926801 7934648 Lapu9g00665 9 7926801 7934648 ECH