Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00662 ATGGCTACTCCAGAAAGATCAACTGTGGAGGCTGGGCCAAATGCTTCTTGCCTGTCCAAAAAGGAAGAGGTTGATGAACTTGAAAATGCCAAAGCCGAAATGGGTGAAGTTATAGAAGAAAATCAAAGATTAAAGATGCGTTTGAACCGAATACTAAATGATTACCGAACACTGCAAATGCAATTCCACAATATAGTTGAACAAGAGACAAAAGATTCTTCTGAGAAACCGAACAAGGATGATGAACATCAAGAAATGATGGAGGAATCAGAACTAGTTTCACTCAGTCTTGGAAGAATTCCAATTCCAAGAAACAATGAGAAAGGTAAAGTCCCTAAAACATTGAAAGAGGAAGAAGAAGATAAAGAAGGGTTGTCCCTTGGACTGGAGTGCAAATTTGAAACATCAAAATCTGGAAGCACAACTGAGCATGTGCCAAATCCAAGCCCTAGCAATAGTGTTGAAGAAGTGCCAAAGGAAGAAACTGCTGCAGAGAGTTGGCCACAAAGCAAGGGAAACAAGACAAATAGAGATGCTGGAGAGGACGAGGTTTCCGAGCAAAACCCTACAAAGAAAGCTAGAGTTTGTGTGAGAGCAAGATGTGACACCCCAACTTTGAACGATGGATGTCAGTGGAGAAAATATGGACAGAAGATTTCAAAGGGAAATCCTTGTCCTCGAGCTTACTATCGTTGCACAGTTGCACCATCATGCCCCGTAAGAAAGCAGGTGCAAAGATGTGCTCAAGACATGTCCATATTAATCACCACCTACGAAGGAACCCACAACCACCCTCTTCCTCTTTCAGCAACAGCCATGGCTTCCACCACTTCCGCTGCTGCTTCCATGCTATTGTCTGGATCATCAACCTCAGGATCAAGACCTTCCCCAAACATCACCACCACTGCTGCAGATCTTCATGGAATCAACTTTTCCCTATCAGATGGTTCCCGATCAAAGCAATACTACCTTTCCCATCCTTCACTCTCATCTTCACCTTCACACCCCACCATCACTCTAGACCTCACTTCTAATCCATCATCCTCTTCAGCTCCTTTTGTCAAATTCACTTCAAATTCAAACTACAACACTCATAGGTACCCTCCTTCCACGAGTCTAAGCTTTAGCTCCTCTGAATCTAATACAGCTTCTTGGAGCAACGGGTTCTTCAGCTACAACACTCAACCATATAATAACAACAGGAATGTGAATGTGAATGTCCTTGGCAACATAAACCTTGGAAGACAACAACCGGAACAACAACCGGAACAACAACCAATGGAGAACATCTATAGTTCCTTCATGCAAAGGAACAACAATCCAATCCCTCCAGCACAACATTCTCTGCCAGACACCATAGCTGCAGCAACAAAAGTAATCACAGCAGACCCCAACTTTCAGTCAGCTTTGGCAGCAGCACTTACTTCAATTATTGGCTCAGGAAGCACTCAGGGAAACCAAGGTGCTGCAGAAAATCTGAGTCAGAAAATAAAATTGGGTGAATTGTTTCCACCATCTTTTGCCTTACCTTCATCTTCAAAAGTCAATGGATGTGCTTCAAGCTTCTTGAACAAATCACCAGCTAATTCACAACCAGGAAGTTTGATGTTTCTTCAACCACCTTTGCCACTTTCTAGCCCCAAAAGTGCTTCTGGGTCTCCCGGAGATCACAGAGACAAGAAAAATTAG 1689 0.4316 MATPERSTVEAGPNASCLSKKEEVDELENAKAEMGEVIEENQRLKMRLNRILNDYRTLQMQFHNIVEQETKDSSEKPNKDDEHQEMMEESELVSLSLGRIPIPRNNEKGKVPKTLKEEEEDKEGLSLGLECKFETSKSGSTTEHVPNPSPSNSVEEVPKEETAAESWPQSKGNKTNRDAGEDEVSEQNPTKKARVCVRARCDTPTLNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVRKQVQRCAQDMSILITTYEGTHNHPLPLSATAMASTTSAAASMLLSGSSTSGSRPSPNITTTAADLHGINFSLSDGSRSKQYYLSHPSLSSSPSHPTITLDLTSNPSSSSAPFVKFTSNSNYNTHRYPPSTSLSFSSSESNTASWSNGFFSYNTQPYNNNRNVNVNVLGNINLGRQQPEQQPEQQPMENIYSSFMQRNNNPIPPAQHSLPDTIAAATKVITADPNFQSALAAALTSIIGSGSTQGNQGAAENLSQKIKLGELFPPSFALPSSSKVNGCASSFLNKSPANSQPGSLMFLQPPLPLSSPKSASGSPGDHRDKKN* 563
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00662 562 ProSiteProfiles WRKY domain profile. 201 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g00662 562 MobiDBLite consensus disorder prediction 133 156 - -
Lapu9g00662 562 MobiDBLite consensus disorder prediction 1 22 - -
Lapu9g00662 562 MobiDBLite consensus disorder prediction 109 128 - -
Lapu9g00662 562 MobiDBLite consensus disorder prediction 323 351 - -
Lapu9g00662 562 MobiDBLite consensus disorder prediction 518 536 - -
Lapu9g00662 562 SMART WRKY_cls 206 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g00662 562 FunFam probable WRKY transcription factor 31 191 268 - -
Lapu9g00662 562 Gene3D WRKY domain 191 268 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g00662 562 SUPERFAMILY WRKY DNA-binding domain 199 267 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g00662 562 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 19 490 IPR044810 GO:0003700
Lapu9g00662 562 Pfam WRKY DNA -binding domain 207 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g00662 562 MobiDBLite consensus disorder prediction 65 191 - -
Lapu9g00662 562 MobiDBLite consensus disorder prediction 68 89 - -
Lapu9g00662 562 Coils Coil 20 61 - -
Lapu9g00662 562 MobiDBLite consensus disorder prediction 518 562 - -
Lapu9g00662 562 MobiDBLite consensus disorder prediction 175 191 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu9g00662 Lapu-Chr9 7879700 7882852 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00662 34 498 WRKY Transcription Factor Family AT5G15130 42.460 2.97e-85 272
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu9g00662 WRKY 1e-23 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00662 - - vun:114162352 796.964
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01363 1 26421666 26423824 Lapu9g00662 9 7879700 7882852 ECH
Lapu2g01473 2 27807772 27809723 Lapu9g00662 9 7879700 7882852 ECH
Lapu9g00662 9 7879700 7882852 Lapu9g00662 9 7879700 7882852 ECH