Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu9g00662 | ATGGCTACTCCAGAAAGATCAACTGTGGAGGCTGGGCCAAATGCTTCTTGCCTGTCCAAAAAGGAAGAGGTTGATGAACTTGAAAATGCCAAAGCCGAAATGGGTGAAGTTATAGAAGAAAATCAAAGATTAAAGATGCGTTTGAACCGAATACTAAATGATTACCGAACACTGCAAATGCAATTCCACAATATAGTTGAACAAGAGACAAAAGATTCTTCTGAGAAACCGAACAAGGATGATGAACATCAAGAAATGATGGAGGAATCAGAACTAGTTTCACTCAGTCTTGGAAGAATTCCAATTCCAAGAAACAATGAGAAAGGTAAAGTCCCTAAAACATTGAAAGAGGAAGAAGAAGATAAAGAAGGGTTGTCCCTTGGACTGGAGTGCAAATTTGAAACATCAAAATCTGGAAGCACAACTGAGCATGTGCCAAATCCAAGCCCTAGCAATAGTGTTGAAGAAGTGCCAAAGGAAGAAACTGCTGCAGAGAGTTGGCCACAAAGCAAGGGAAACAAGACAAATAGAGATGCTGGAGAGGACGAGGTTTCCGAGCAAAACCCTACAAAGAAAGCTAGAGTTTGTGTGAGAGCAAGATGTGACACCCCAACTTTGAACGATGGATGTCAGTGGAGAAAATATGGACAGAAGATTTCAAAGGGAAATCCTTGTCCTCGAGCTTACTATCGTTGCACAGTTGCACCATCATGCCCCGTAAGAAAGCAGGTGCAAAGATGTGCTCAAGACATGTCCATATTAATCACCACCTACGAAGGAACCCACAACCACCCTCTTCCTCTTTCAGCAACAGCCATGGCTTCCACCACTTCCGCTGCTGCTTCCATGCTATTGTCTGGATCATCAACCTCAGGATCAAGACCTTCCCCAAACATCACCACCACTGCTGCAGATCTTCATGGAATCAACTTTTCCCTATCAGATGGTTCCCGATCAAAGCAATACTACCTTTCCCATCCTTCACTCTCATCTTCACCTTCACACCCCACCATCACTCTAGACCTCACTTCTAATCCATCATCCTCTTCAGCTCCTTTTGTCAAATTCACTTCAAATTCAAACTACAACACTCATAGGTACCCTCCTTCCACGAGTCTAAGCTTTAGCTCCTCTGAATCTAATACAGCTTCTTGGAGCAACGGGTTCTTCAGCTACAACACTCAACCATATAATAACAACAGGAATGTGAATGTGAATGTCCTTGGCAACATAAACCTTGGAAGACAACAACCGGAACAACAACCGGAACAACAACCAATGGAGAACATCTATAGTTCCTTCATGCAAAGGAACAACAATCCAATCCCTCCAGCACAACATTCTCTGCCAGACACCATAGCTGCAGCAACAAAAGTAATCACAGCAGACCCCAACTTTCAGTCAGCTTTGGCAGCAGCACTTACTTCAATTATTGGCTCAGGAAGCACTCAGGGAAACCAAGGTGCTGCAGAAAATCTGAGTCAGAAAATAAAATTGGGTGAATTGTTTCCACCATCTTTTGCCTTACCTTCATCTTCAAAAGTCAATGGATGTGCTTCAAGCTTCTTGAACAAATCACCAGCTAATTCACAACCAGGAAGTTTGATGTTTCTTCAACCACCTTTGCCACTTTCTAGCCCCAAAAGTGCTTCTGGGTCTCCCGGAGATCACAGAGACAAGAAAAATTAG | 1689 | 0.4316 | MATPERSTVEAGPNASCLSKKEEVDELENAKAEMGEVIEENQRLKMRLNRILNDYRTLQMQFHNIVEQETKDSSEKPNKDDEHQEMMEESELVSLSLGRIPIPRNNEKGKVPKTLKEEEEDKEGLSLGLECKFETSKSGSTTEHVPNPSPSNSVEEVPKEETAAESWPQSKGNKTNRDAGEDEVSEQNPTKKARVCVRARCDTPTLNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVRKQVQRCAQDMSILITTYEGTHNHPLPLSATAMASTTSAAASMLLSGSSTSGSRPSPNITTTAADLHGINFSLSDGSRSKQYYLSHPSLSSSPSHPTITLDLTSNPSSSSAPFVKFTSNSNYNTHRYPPSTSLSFSSSESNTASWSNGFFSYNTQPYNNNRNVNVNVLGNINLGRQQPEQQPEQQPMENIYSSFMQRNNNPIPPAQHSLPDTIAAATKVITADPNFQSALAAALTSIIGSGSTQGNQGAAENLSQKIKLGELFPPSFALPSSSKVNGCASSFLNKSPANSQPGSLMFLQPPLPLSSPKSASGSPGDHRDKKN* | 563 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu9g00662 | 562 | ProSiteProfiles | WRKY domain profile. | 201 | 267 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lapu9g00662 | 562 | MobiDBLite | consensus disorder prediction | 133 | 156 | - | - | |
Lapu9g00662 | 562 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Lapu9g00662 | 562 | MobiDBLite | consensus disorder prediction | 109 | 128 | - | - | |
Lapu9g00662 | 562 | MobiDBLite | consensus disorder prediction | 323 | 351 | - | - | |
Lapu9g00662 | 562 | MobiDBLite | consensus disorder prediction | 518 | 536 | - | - | |
Lapu9g00662 | 562 | SMART | WRKY_cls | 206 | 266 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lapu9g00662 | 562 | FunFam | probable WRKY transcription factor 31 | 191 | 268 | - | - | |
Lapu9g00662 | 562 | Gene3D | WRKY domain | 191 | 268 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lapu9g00662 | 562 | SUPERFAMILY | WRKY DNA-binding domain | 199 | 267 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lapu9g00662 | 562 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 19 | 490 | IPR044810 | GO:0003700 | |
Lapu9g00662 | 562 | Pfam | WRKY DNA -binding domain | 207 | 265 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lapu9g00662 | 562 | MobiDBLite | consensus disorder prediction | 65 | 191 | - | - | |
Lapu9g00662 | 562 | MobiDBLite | consensus disorder prediction | 68 | 89 | - | - | |
Lapu9g00662 | 562 | Coils | Coil | 20 | 61 | - | - | |
Lapu9g00662 | 562 | MobiDBLite | consensus disorder prediction | 518 | 562 | - | - | |
Lapu9g00662 | 562 | MobiDBLite | consensus disorder prediction | 175 | 191 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu9g00662 | Lapu-Chr9 | 7879700 | 7882852 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu9g00662 | 34 | 498 | WRKY Transcription Factor Family | AT5G15130 | 42.460 | 2.97e-85 | 272 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Lapu9g00662 | WRKY | 1e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu9g00662 | - | - | vun:114162352 | 796.964 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lapu1g01363 | 1 | 26421666 | 26423824 | Lapu9g00662 | 9 | 7879700 | 7882852 | ECH | |
Lapu2g01473 | 2 | 27807772 | 27809723 | Lapu9g00662 | 9 | 7879700 | 7882852 | ECH | |
Lapu9g00662 | 9 | 7879700 | 7882852 | Lapu9g00662 | 9 | 7879700 | 7882852 | ECH |