Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00653 ATGGGCATGGACTACTACAACATACTCAAAGTGAATCGCAACGCCAGCGACGAGGATTTGAAGAAAGCGTACAAGCGCCTCGCCCGCATATGGCACCCCGACAAGAACCCCGTCAACAAGAGCGAGGCCGAGGCCAAATTCAAGCGAATCTCCGAAGCCTATGATGTCCTCAGCGACCCTCAGAAGCGCCAGATCTACGATCTCTACGGCGAGGAGGCTCTCAAATCCGGCCAGTTTCCGCCGCCGCCACACTCCTCCTCCTCTTCCTCCTCCCGCGCCTTCCACCGCCAAACTCCCCCTGCCTCCTCCTTCCGCTTCAACCCACGCGACGCCGACGACATCTACGCCGAGTTCTTTGGCCCGGACGACGTCGGCTCCTCGCGCCGCGACGGCTTTTTCCGGACCTCCAACGGCGGCGGCGCCCCCAGGAGGGCCACTCCGGTCGAGAACGCGCTCCACTGCAGCTTGGAGGACCTCTACAAGGGCGTCAAGAAGAAGATGAAGATTTCCAGGAACGTCTACGACGCTTTTGGCAAATCTCGAAACGTGGAAGAGATTTTGACTATAGAGATAAAACCTGGCTGGAAAAAAGGAACAAAGGTTACCTTTCCAGAGAAGGGTAACCAGGAGCCTGGCGTCATCCCAGCAGATCTAATTTTTGTGATAGATGAGAAACCACATGCTGTTTATAGAAGGGATGGCAATGATTTGGTGATCAACCAGGAGATAACCCTTCTTGAGGCCCTTACAGGTAAAACATTGGACCTCACCACCTTGGATGGAAGGAGCCTCGTCATACCATTGACAGATATTGTCAAACCTGGTAGCGAAGTTGTAGTCCCTGACGAAGGAATGCCTATATCGAAAGAGCCTGGGAAGAAGGGGAATTTGAGAGTTAAGCTTGACGTCAAGTATCCTTCAAGGCTAACTCCAGAGCAGAAGTCTGATCTGAGGAGAGTTTTAGGTGGAATCTCATGA 978 0.5337 MGMDYYNILKVNRNASDEDLKKAYKRLARIWHPDKNPVNKSEAEAKFKRISEAYDVLSDPQKRQIYDLYGEEALKSGQFPPPPHSSSSSSSRAFHRQTPPASSFRFNPRDADDIYAEFFGPDDVGSSRRDGFFRTSNGGGAPRRATPVENALHCSLEDLYKGVKKKMKISRNVYDAFGKSRNVEEILTIEIKPGWKKGTKVTFPEKGNQEPGVIPADLIFVIDEKPHAVYRRDGNDLVINQEITLLEALTGKTLDLTTLDGRSLVIPLTDIVKPGSEVVVPDEGMPISKEPGKKGNLRVKLDVKYPSRLTPEQKSDLRRVLGGIS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00653 325 Pfam DnaJ C terminal domain 149 306 IPR002939 -
Lapu9g00653 325 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 3 321 - -
Lapu9g00653 325 SMART dnaj_3 3 62 IPR001623 -
Lapu9g00653 325 CDD DnaJ 4 59 IPR001623 -
Lapu9g00653 325 FunFam DnaJ subfamily B member 13 3 129 - -
Lapu9g00653 325 SUPERFAMILY HSP40/DnaJ peptide-binding domain 149 227 IPR008971 GO:0006457|GO:0051082
Lapu9g00653 325 Gene3D - 227 307 - -
Lapu9g00653 325 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Lapu9g00653 325 Gene3D DnaJ domain 2 130 IPR036869 -
Lapu9g00653 325 MobiDBLite consensus disorder prediction 80 104 - -
Lapu9g00653 325 MobiDBLite consensus disorder prediction 74 107 - -
Lapu9g00653 325 SUPERFAMILY Chaperone J-domain 3 86 IPR036869 -
Lapu9g00653 325 FunFam DNAJ heat shock family protein 226 321 - -
Lapu9g00653 325 Pfam DnaJ domain 4 67 IPR001623 -
Lapu9g00653 325 CDD DnaJ_C 152 309 - -
Lapu9g00653 325 PRINTS DnaJ domain signature 62 81 IPR001623 -
Lapu9g00653 325 PRINTS DnaJ domain signature 42 62 IPR001623 -
Lapu9g00653 325 PRINTS DnaJ domain signature 6 24 IPR001623 -
Lapu9g00653 325 PRINTS DnaJ domain signature 24 39 IPR001623 -
Lapu9g00653 325 SUPERFAMILY HSP40/DnaJ peptide-binding domain 230 315 IPR008971 GO:0006457|GO:0051082
Lapu9g00653 325 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Lapu9g00653 325 Gene3D - 147 225 - -
Lapu9g00653 325 FunFam Dnaj homolog subfamily b member 144 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00653 Lapu-Chr9 7744748 7750037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00653 5 74 C2H2 Transcription Factor Family AT1G74250 35.135 2.44e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00653 K09510 - gmx:100819472 557.37