Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00648 ATGTCCCAAGGATCTCCCCCGCAAGACAACAGAGAACCCTCGCCGGAACCCGATTCGCACAAGGAGGAAACAACCACCAACGCCGCCGCTACCACCGCCACCGCCGCCGCCGATGCTGCTCCTCCTGTCCCCACCCGGAACCGTCCCTCTCGCGCCTGTACCATTCGCACGGCTGCACGCCTCTACTCGGCGTCGCAGCCGGCGAGGCCGAAGGCCGCAAAGAGGGAGTCTCGGCGCGAGGAGTCGCCGGCGCCACCGTCTCCGCAGCCGCAGCAATGCGGCAAGATCGTGACGCCGCTGGTGGAACCGCCCCCGCCGGCGCAGTTGCCGCGCTACAACCTCCGCTCCATGTGGGAATTGGCTTCAATACTCAATTTTTTGAATCTTTTTAGGCATCTTTTGAATATTTCAGTAGAGTTCTCGGCTGAAGAGTTTGAGACGGCTTTGCTCACTCCCAATGACACATTGGGTGATATACATATGCCTTTGCTAAAGGCAATTCCTCCCATTACACGAATGGCACTCTCACGTGATACTTGGATAACCGTATTATGCAGAAAATTGAGAGATTGGTGGCACTGGGTTGCCGATGGGGATCTTCCTATCGTTGCTTCACATGGAGCGGAGATTGAAGTATATAAATCACTTGATCCAGGGGTTCGTGTGGTCATCTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCAGAAGTTACATTGACAGCTCAATCAAACATGGTATTCCACTTTCAACATTTCGTAAGGAGCGAATTGGTGGTGATTCGCATGGAGTTTCTTATTGGTATGAAGATGACCAAATTATTGGTCATAGGTTGTATCGGGAGATAAGGAAAACTGAGGTGGTTCAAATGAAGAAAGGGAAACCAAGAGGTTCCCAGGTTTTTTCTAATACAACCTACCAGTGGGAAACAGTTGCTACCAATTTTGATGAATTTCTGGATGTTTCTGAGAAGCTTTTCACAAGTAAAAACAGAACAGAGGTTTCTGTGGGGAAGAAGGTGAAGATAGACATGCTCCCTGAAATTGAGAAGGTTCACAAGAGAAAGGAGAGGTTGATGAAAAAACAACACAGACAAGCTCTTCTTCTTGATAATTTCTTGGGTGTTGATGGGCTTGCCCTCGGGCGTTCACTACGTGATAGGAAACCTGTTACCTACACTTTCGATGATTATGATCGATCCATCAATGAGGCAATTAAGATAACCAAACGGAAACCACCATCCCCAGAATCTATACCCAGAGGAGAAGGAGGATCAAAACCCGAAGCTTTATCCAATGGTAAATGGAGTGGTCCTTCTCCTTCGCATGACCCCCAAGATCTAAATTTTGGTATGCCATCTCCAAAATCACCAGACTTCGATGATATGGTGGAAGATAATCAAACTGACATACTGGACTTGGATCGAAGCAATCGACGAAGACAGAAGCCTAAACGGTATTCAGAGAAAGAGTTTGTTGAAGCATTGTCAGATAATGAGGCGGACTATGACAGTGATGATGATATTGTGGGAGAAGCCGTTTATGATGAAGAGTATCTCCAGAAACGCAAGCAGAGAAGGAAGGCTTCTAGTAGCTCTGGATCTGAAGGAGATGAAGAATATAATTGGAATGAAGATAATGTTGAAGATGAAGAAGAGGAGGATGAAGAAGATTCCATGAGTGTCAGCGAAGATAGTGACAAGCCCCGTAAATTCAAGCGATTGGCAGGCCGTACTAGGAGGGAAACTAAACTCAGGTCTGTGGGTGAGATTCAATCAGGTCTAAGACGCAGTAAGAGGGCAACACAGAATCGAATAAATTACCGGCAGTTAGAGATGTCTGATTCAGAAACAGAGTTCATTAAACCTGACAAGTCTAATGCGTCAGATTATCACTCAGATCCTACTGAGAATGGAGAGTATATGATGGAAAGTGAAGATTCAGATGACAATGACGTTGAAGAACAAGAAACCAAAGATGTCAAGCCTGTTACCTACCCTGCAGAAGGGAACAACCAATATCCTGCTGTAGAGGAGAATGAACAAAGCAAAAACCAGCCTCCTGAAAGATCTAGTAGTCCAGGTCAGGAGGAAATTGAGGGCACCACAAAGCGACGCTTCCTTGATTTGAATGAGCTGGCCCCTAGCTCAGGTTTTGATGACGGTCCAAATACAACAACAAAAGATGAAGGCAATGATGATTTGTGA 2214 0.4634 MSQGSPPQDNREPSPEPDSHKEETTTNAAATTATAAADAAPPVPTRNRPSRACTIRTAARLYSASQPARPKAAKRESRREESPAPPSPQPQQCGKIVTPLVEPPPPAQLPRYNLRSMWELASILNFLNLFRHLLNISVEFSAEEFETALLTPNDTLGDIHMPLLKAIPPITRMALSRDTWITVLCRKLRDWWHWVADGDLPIVASHGAEIEVYKSLDPGVRVVILKALCDIRVEQEDIRSYIDSSIKHGIPLSTFRKERIGGDSHGVSYWYEDDQIIGHRLYREIRKTEVVQMKKGKPRGSQVFSNTTYQWETVATNFDEFLDVSEKLFTSKNRTEVSVGKKVKIDMLPEIEKVHKRKERLMKKQHRQALLLDNFLGVDGLALGRSLRDRKPVTYTFDDYDRSINEAIKITKRKPPSPESIPRGEGGSKPEALSNGKWSGPSPSHDPQDLNFGMPSPKSPDFDDMVEDNQTDILDLDRSNRRRQKPKRYSEKEFVEALSDNEADYDSDDDIVGEAVYDEEYLQKRKQRRKASSSSGSEGDEEYNWNEDNVEDEEEEDEEDSMSVSEDSDKPRKFKRLAGRTRRETKLRSVGEIQSGLRRSKRATQNRINYRQLEMSDSETEFIKPDKSNASDYHSDPTENGEYMMESEDSDDNDVEEQETKDVKPVTYPAEGNNQYPAVEENEQSKNQPPERSSSPGQEEIEGTTKRRFLDLNELAPSSGFDDGPNTTTKDEGNDDL* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00648 737 MobiDBLite consensus disorder prediction 642 656 - -
Lapu9g00648 737 MobiDBLite consensus disorder prediction 541 564 - -
Lapu9g00648 737 MobiDBLite consensus disorder prediction 500 516 - -
Lapu9g00648 737 PANTHER REMODELING AND SPACING FACTOR 1 45 714 IPR028938 GO:0006355|GO:0031213
Lapu9g00648 737 MobiDBLite consensus disorder prediction 598 616 - -
Lapu9g00648 737 MobiDBLite consensus disorder prediction 517 536 - -
Lapu9g00648 737 MobiDBLite consensus disorder prediction 617 633 - -
Lapu9g00648 737 Pfam DDT domain 122 167 IPR018501 -
Lapu9g00648 737 MobiDBLite consensus disorder prediction 677 700 - -
Lapu9g00648 737 MobiDBLite consensus disorder prediction 461 499 - -
Lapu9g00648 737 MobiDBLite consensus disorder prediction 408 737 - -
Lapu9g00648 737 MobiDBLite consensus disorder prediction 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00648 Lapu-Chr9 7662323 7670510 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Lapu9g00648 DDT 3.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00648 - - gmx:100816258 1159.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01071 3 11474860 11484232 Lapu9g00648 9 7662323 7670510 PCT