Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00638 ATGTCAGCCTCTAGTCATGCAGTTGCAAAGGCTGTGGTTGCCACAGCTGGGGCTATGTTACTCATTGCTGCTGTTTTTGTTTACTTCTTTCACAAATTTGTGCTTTCTAGATACCACCAGAGACACAAAATTGGAGCAAGTTTGCTTCGAGAATCAGGAGTGAACCTTGAGTATATAAACAAAGTTGGTGGCAATGTGAAGGGATTAATTGTTGAAGAAAATGGGGTTGATGTTCTTTATGTGATGGACACAGAAAGAAGACCATTGATAACTGGATTCCAAAATAGTATACTCAATCCAAGTTATGAACATGATGAAGAAGAAAAGAGAATAGATATAATGGTCCACAGGTCCAAAGTAACCAAGCCAGAAATTCCACAGGCATGTGAATCTCCAAGCTTGGTTGGTCTTGAGAATCAAGTTAAGCCAGAATCACAAACACCATCAGTTTCAACATCACTAACACCGAGGCAAAACTTGCCACAGTCACCTCAGCTACCACCTTCACTCCAACCACCACCACAATCTTCACCAATGATTCTTGAGAACAAGAATACTCAACCACCACCACCTCCTCCTCCTCCAACTCGTCCTCCACCACCACCACCTGGTCCACCTCCACTTCCAAAGGCCAGTGGCTTCATTTCATCACTGAAACCCCCACCTGCACCCAAAGGGAAAACTAACATAAGAAGCACTAAAGAGGGTATGGCAGGGGAGACTTCAAGAGAGAAGGGTGTTGGCCAAACAAGGCTGAAGCCTCTACACTGGGATAAGGTTGTAGCAAATGTTGATCATTCAACAGTGTGGGATCAGATCAATGATGGCTCTTTCCGGTTTGATGATGAACTAATGGAATCGCTCTTTGGATATTCAAGTAGCTATAAAACCCAAGAAAGAAACAGAACTCTTTCCACTTTGGCCAAGTCCAATTCCAATGCACCAACTCAAATATTCATTCTTGACCCAAGGAAATCTCAAAACACTGCCATTGTGCTAAGATCACTAGCCATTTCTCGCAAGGGAATCTTGGATGCTGTTCTTGATGGTCAGGGTCTAAGTGTTGAGACACTTGAAAGACTCACTAAAATAGCTCCCACTCAAGAAGAGGAAGCAAAAATCATCCAATTCAGTGGCAACCCGGATCAGCTTGCTGATGCCGAGTCTTTCCTGTACTACATTCTTAAAGCAGTTCCAACAGCATTCAACCGTTTGAAAGCAATGCTTTTCAGGTCGAGTTATGATTGTGAAATTCTTCAGCACAAGGAACAGCTACAAACACTTGAAATGAGTTGCAAGGAACTGAGAACTAGCGGTCTGTTTTTGAAACTCCTTGAGGCCATTCTCAAGGCTGGGAATCGGATGAATGCTGGAACTTCAAGAGGCAATGCACAAGGTTTCAACCTGAGTGCTCTTAGAAAACTTTCTGATGTGAAAAGCACAGATGGGAAGACTAGTTTGCTTCATTTTATAGTAGAACAAGTGGTTCAGTCAGAAGGAAAAAGACAAGCTCTCTATCAAAAGCACAAACTTCACATAAGCAGTGTTGAAGCAAGCAATGAGAATAGACCTTATTCATATAGCCTGATACAACAAGAGGCAGATAAAGAATACACAATGCTTGGTTTGCAGGTGTTAGGTGGACTAAGTGATGAGTTATCTGAAGCAAAGAAAGCAGCTGGTATTGAGTATCACAATTTCATCACAATGTGTTCCACTCTAAATGCTCATGTTAGTGAAATTAGACAGATTGTAACATGTTGTGGCAACACCAGGAGTGGTGGATTTATCAACGAAATGAAAGGGTTCCTAGAGGAATGTGAGGGAGAACTTGAGGTGGTGAAAGAGGAGCAGACAAGGATCATGGAGCTTGTGAAAAAAACAAACGATTACTATCTATCAGGAACATCCAAAGACAACATGGTAAACCCTTTTCAACTGTTTGTTATTGTAAAGAATTTTGTTGACATGGTAGATCAGGCTCGCATGGAACTAAAGAGGAAAGTAGAAAAGAAGAACGTGGGAGGAGAGGCTGTGTCAACAACACCACCTTTGTCACCATCAAGGAGGGCGCCACTGAGATTCCCTAACTTTGATTTGTATTTTCTGTCAAATGTGTCAGAAACTTCATCTTCTACCCAATCCGAAGATGATTTCTGA 2160 0.4204 MSASSHAVAKAVVATAGAMLLIAAVFVYFFHKFVLSRYHQRHKIGASLLRESGVNLEYINKVGGNVKGLIVEENGVDVLYVMDTERRPLITGFQNSILNPSYEHDEEEKRIDIMVHRSKVTKPEIPQACESPSLVGLENQVKPESQTPSVSTSLTPRQNLPQSPQLPPSLQPPPQSSPMILENKNTQPPPPPPPPTRPPPPPPGPPPLPKASGFISSLKPPPAPKGKTNIRSTKEGMAGETSREKGVGQTRLKPLHWDKVVANVDHSTVWDQINDGSFRFDDELMESLFGYSSSYKTQERNRTLSTLAKSNSNAPTQIFILDPRKSQNTAIVLRSLAISRKGILDAVLDGQGLSVETLERLTKIAPTQEEEAKIIQFSGNPDQLADAESFLYYILKAVPTAFNRLKAMLFRSSYDCEILQHKEQLQTLEMSCKELRTSGLFLKLLEAILKAGNRMNAGTSRGNAQGFNLSALRKLSDVKSTDGKTSLLHFIVEQVVQSEGKRQALYQKHKLHISSVEASNENRPYSYSLIQQEADKEYTMLGLQVLGGLSDELSEAKKAAGIEYHNFITMCSTLNAHVSEIRQIVTCCGNTRSGGFINEMKGFLEECEGELEVVKEEQTRIMELVKKTNDYYLSGTSKDNMVNPFQLFVIVKNFVDMVDQARMELKRKVEKKNVGGEAVSTTPPLSPSRRAPLRFPNFDLYFLSNVSETSSSTQSEDDF* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00638 719 SUPERFAMILY Formin homology 2 domain (FH2 domain) 190 672 - -
Lapu9g00638 719 Gene3D Formin, FH2 domain 264 677 IPR042201 -
Lapu9g00638 719 PANTHER FORMIN-RELATED 4 688 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lapu9g00638 719 SMART it6_source 244 673 IPR015425 -
Lapu9g00638 719 ProSiteProfiles Formin homology-2 (FH2) domain profile. 242 684 IPR015425 -
Lapu9g00638 719 MobiDBLite consensus disorder prediction 123 248 - -
Lapu9g00638 719 MobiDBLite consensus disorder prediction 184 210 - -
Lapu9g00638 719 MobiDBLite consensus disorder prediction 138 160 - -
Lapu9g00638 719 MobiDBLite consensus disorder prediction 161 175 - -
Lapu9g00638 719 Pfam Formin Homology 2 Domain 249 658 IPR015425 -
Lapu9g00638 719 Coils Coil 597 617 - -
Lapu9g00638 719 Coils Coil 418 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00638 Lapu-Chr9 7545735 7548480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00638 8 717 FH2 protein (formin) Gene Family AT1G70140 40.903 7.18e-158 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00638 - - gsj:114409782 1178.7