Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00622 ATGGCAATGGCTGCTGTTCTGCGTCGCGAAGGGAGGCGTTTGACCCAACCAATCAACGCTCTCCATTCGTCTCTCATCTCTCAAGACCAAGCCCCTCATGGCGCGCGTTCCATTTCCACCCAAGTAGTGAGGAACCGAATGAAGAGTGTGAGGAATATCCAGAAAATCACCAAGGCCATGAAGATGGTTGCCGCATCCAAGCTTCGAGCCGTCCAAACAAGAGCTGAAAATTCCCGTGGCCTCTGGCAACCATTCACTGCTCTTCTTGGTGACAATCCCAGTGCTGATGTTAAGAAGAGTGTTGTTGTTACCATTTCTTCGGACAAAGGTCTTTGTGGTGGAATCAATTCCACATCTGTCAAGATAAGCAGGGCTTTGCATAAATTGAATTCCGGGCCTGATAAAGAGACAAAATATGTCATATTGGGAGAGAAGGCTAAGGCTCAATTGATACGTGACTCAAAGAAAGACATTGAGCTCTGCCTTACTGAATTACAGAAAAATCCTTTGAATTATACCCAGGTGTCTGTCTTGGCAGATGATATTCTAAAGAATGTGGAGTATGATGCATTAAGGATTGTTTTCAACAAATTTCAATCTGTTGTATCATTTTTGCCAACAGTGTCAACTGTACTGTCTCCTGAGGTTATTGAGAAAGAGGCTGAATCAGGAGGAAAGCTTGGGGAACTGGATTCATATGAGATTGAAGGTGGCGAGACAAAATCTGAAATTCTTCAGAATCTGGCTGAGTTCCAGTTTTCTTGTGTCATGTACAATGCGGTGTTGGAGAATGCTTGCAGTGAGCAAGGAGCAAGAATGTCTGCCATGGACAGCTCTAGTAGGAACGCTGGGGAAATGCTTGATCGTCTCACCCTCACTTATAACAGAACTCGTCAAGCATCTATCACCACAGAATTGATAGAGATTATCTCTGGAGCTTCGGCACTGGAAGGTTAA 957 0.4462 MAMAAVLRREGRRLTQPINALHSSLISQDQAPHGARSISTQVVRNRMKSVRNIQKITKAMKMVAASKLRAVQTRAENSRGLWQPFTALLGDNPSADVKKSVVVTISSDKGLCGGINSTSVKISRALHKLNSGPDKETKYVILGEKAKAQLIRDSKKDIELCLTELQKNPLNYTQVSVLADDILKNVEYDALRIVFNKFQSVVSFLPTVSTVLSPEVIEKEAESGGKLGELDSYEIEGGETKSEILQNLAEFQFSCVMYNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00622 318 PIRSF ATP_synthase_gamma 6 316 - -
Lapu9g00622 318 FunFam ATP synthase subunit gamma 63 275 - -
Lapu9g00622 318 FunFam ATP synthase gamma chain 271 313 - -
Lapu9g00622 318 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 40 316 IPR035968 GO:0015986|GO:0045261|GO:0046933
Lapu9g00622 318 ProSitePatterns ATP synthase gamma subunit signature. 302 315 IPR023632 -
Lapu9g00622 318 PRINTS ATP synthase gamma subunit signature 263 282 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lapu9g00622 318 PRINTS ATP synthase gamma subunit signature 189 206 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lapu9g00622 318 PRINTS ATP synthase gamma subunit signature 97 116 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lapu9g00622 318 PRINTS ATP synthase gamma subunit signature 294 315 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lapu9g00622 318 PANTHER ATP SYNTHASE GAMMA CHAIN 28 316 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lapu9g00622 318 Pfam ATP synthase 41 316 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lapu9g00622 318 NCBIfam ATP synthase F1 subunit gamma 39 316 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lapu9g00622 318 Hamap ATP synthase gamma chain [atpG]. 37 316 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lapu9g00622 318 Gene3D ATP synthase, gamma subunit, helix hairpin domain 43 313 - -
Lapu9g00622 318 CDD F1-ATPase_gamma 39 313 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lapu9g00622 318 Gene3D - 63 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00622 Lapu-Chr9 7304124 7309848 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00622 43 316 Primary Pumps ATPases AT1G15700 30.769 1.67e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00622 K02136 - gmx:100813657 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00622 9 7304124 7309848 Lapu9g00622 9 7304124 7309848 ECH