Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00592 ATGGAACAAGAAGAAGAAGAAGAAGCGTCGCTGCAACGAGTCGCCGACTCGTCCCTATCCACCAAGTCACTCACTTCCACAGCTTCCGATGGAGAGCAACTCCACTCGGAAACCCTACTTCTGCATTCTTCTGCGCTTCCGCACGACAACGCTGCTCATATGCAAGGAAGCTCTACCGCACGTAAGATTGGCCTAGATGAGAGTAAGGAGTCAGCTCAGCATTCTGATGAGAACATTGTAAAGGAGGCAGTCGAGGCACCTCCAAACAACACAGAAGATCAACTTCAGATGTCTGTTTGTTCAACTTCATTATCTAAACTATCACCAACTTCTGTATCGCAGAATTTATCATCTGCCCCTAGTCCAACTGAAACCAAACAGAGACTGTCTCCTCCTAAGCTTAATAATGTAAAAGTGCCAAAAGTAGATAAAGGAACTCCTTCTGGTGCTACAACGTTATCTTCTGTTTCTGTTGCAAGGGCATCTGCATCTGATGGATACAACTGGCGGAAGTACGGCCAGAAGCAAGTGAAGAGTCCTACCGGTTCTCGAAGTTATTACAGGTGTACCCATTCAAATTGTTGTGCTAAGAAGATTAAATTTTGTGACCATTCAGGATATGTGATAGAGATTGTTTACAAAAGTCAACATAGTCATGATCCACCGCACAAAATTGATTCTACAAAGGAAAGTAAATTCCTTCCTTACAGTGAACCTAAAGTAGAATGCAGTGTTCCAAAGCAGTCTAGCAGAGTTCTGAATGATTCTGATCCGTCATCTTCTCCAAAAGAACCTTTATATGAATCATCTTGCAGTGCTAATAAGAATCTAGAAAAATCATCCAATGATGAGAATGGTAAAGCTTTTTTGAAGGAAGAGCATGTTAATGACCCTAAGCCAAAAAGAAGATTGAACAAAGGTGATTTAACATGCTTGGATTCAGCAGTCAAACCTGGAAAGAAACCAAGGTTTGTTGTACATGCAACAGAGGATATGGGGATATCAAGTGATGGATACCGATGGCGCAAATATGGACAAAAATTGGTGAAGGGAAATCCACATTTCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTCCGAAAGCACATTGAGACTGCTGTGGATAACGCAAAAGCTCTCATTATAACATACAAGGGAGTACATGACCATGACATGCCTGTGCCCAAGAAAAGACATGGTCCACCAAGTGCTTCCCTTGTGGCTGCTGCAGCTCCTGCTTCGGTGAACACTTTGCAGTTAAAAAAAACTGGCTTGATAGAAAACCAGGAAACTTCTGCTCAATGCTCAGAGGACACAGAAGGAGAATTAACCGGGGAAGCGTTGGACCTTGGGGGTGAGAAAGCAATCGAGTCAGCTCGAACTCTTCTAAGTATAGGTTTTGAAATTAAACCTTGTTGA 1425 0.4281 MEQEEEEEASLQRVADSSLSTKSLTSTASDGEQLHSETLLLHSSALPHDNAAHMQGSSTARKIGLDESKESAQHSDENIVKEAVEAPPNNTEDQLQMSVCSTSLSKLSPTSVSQNLSSAPSPTETKQRLSPPKLNNVKVPKVDKGTPSGATTLSSVSVARASASDGYNWRKYGQKQVKSPTGSRSYYRCTHSNCCAKKIKFCDHSGYVIEIVYKSQHSHDPPHKIDSTKESKFLPYSEPKVECSVPKQSSRVLNDSDPSSSPKEPLYESSCSANKNLEKSSNDENGKAFLKEEHVNDPKPKRRLNKGDLTCLDSAVKPGKKPRFVVHATEDMGISSDGYRWRKYGQKLVKGNPHFRNYYRCTSAGCPVRKHIETAVDNAKALIITYKGVHDHDMPVPKKRHGPPSASLVAAAAPASVNTLQLKKTGLIENQETSAQCSEDTEGELTGEALDLGGEKAIESARTLLSIGFEIKPC* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00592 474 MobiDBLite consensus disorder prediction 109 132 - -
Lapu9g00592 474 ProSiteProfiles WRKY domain profile. 330 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g00592 474 SUPERFAMILY WRKY DNA-binding domain 161 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g00592 474 Pfam WRKY DNA -binding domain 337 392 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g00592 474 Pfam WRKY DNA -binding domain 165 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g00592 474 Gene3D WRKY domain 149 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g00592 474 Gene3D WRKY domain 320 396 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g00592 474 SMART WRKY_cls 163 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g00592 474 SMART WRKY_cls 335 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g00592 474 MobiDBLite consensus disorder prediction 280 306 - -
Lapu9g00592 474 MobiDBLite consensus disorder prediction 242 306 - -
Lapu9g00592 474 MobiDBLite consensus disorder prediction 63 77 - -
Lapu9g00592 474 FunFam WRKY transcription factor 323 396 - -
Lapu9g00592 474 ProSiteProfiles WRKY domain profile. 158 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g00592 474 MobiDBLite consensus disorder prediction 1 77 - -
Lapu9g00592 474 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 78 425 IPR044810 GO:0003700
Lapu9g00592 474 MobiDBLite consensus disorder prediction 13 40 - -
Lapu9g00592 474 SUPERFAMILY WRKY DNA-binding domain 329 395 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g00592 474 MobiDBLite consensus disorder prediction 109 153 - -
Lapu9g00592 474 MobiDBLite consensus disorder prediction 243 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00592 Lapu-Chr9 6833534 6840352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00592 26 474 WRKY Transcription Factor Family AT4G30935 47.957 4.58e-123 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu9g00592 WRKY 1.6e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00592 - - gmx:100127388 710.294