Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00591 ATGCCAGATTTAGGGAACTTCTCTCTGTCTTCGACTCTCACGCTCTCTCACTGCACCTCTGATGTCGCAGACGCTCCCGTCAAAACCCTACCCAATGCCTTCGCTTCCGACCCTGCCTTCGAGCCTCGGGTTTTGAAGCGCACCCGTGGCTCCCTGGATCGGGTCAAGAAGCCCGCCTCTCACAAAGCCTTCCAGGATCGCCTCAAAGATCCCTTCTCTCATCCTTTTCTTGTTGGCGCTCCCAAGATGGGGGAATGTTGTATTTGCCACCATTTTATCTACCCTGGGGAGGAGCTATTGTGTTCGGTTCGCCGATGCGACGCGCGCTGCCATTCTGAATGTGCAAAAGATTCTGCTGGAGCCACCAGTCTGAAAAAGTACAAGTGTCCACAGCATGTATGCTTCATTTGCAAGCAAAAAAAGCACTTGAGGTGTGTACGTTGTAAAATTGCGTTCCATAATAAATGTGCACCATGGCCAGATGCAGTGCGGCCGCTAGAAGATCATCCTGGGCTTGCTGTTTGCTGGAGGCATCCTTCCGATTGGCGCCTGGATAGGAAGCCTGATGCTTCAACCAGTGACATTTCGGAAGTATTCTATCGCTTGCCTCTTCCCTTTATCAGTGAGGAGTTTAAGATTGATTCCTCCTGGAAAGACATGGACAGTAAGATGGAGCAGCCACCACCATATGTGCACATAAGACGCAATATATACTTAATAAAGAAGAAACGTAGTAATGTGGATGATGGTGCAGGGTGCACCAGTTGTAGTTCAACATGTTCTGATGATTGTGTGTGCAGGGTTCAATGCATAAGCTGCTCAAAAGCATGTCGCTGCTCTGAAAATTGCAATAATCGTCCATTTCGCAAGGAGAAAAAGATCAAGATAGTCAAGACTGAACATTGTGGATGGGGAGTTGAGGCAGCTGAAACAATCGATAAAGGTGGATTTATAGTTGAGTATATTGGAGAAGTAATTGACGATGCTTTATGTGAGAAGAGGCTCTGGGACATGAAATACATGGGTGTACAGAATTTTTACATGTGTGAGATTCGGAAAGACTTCACAATTGATGCAACTTTCAAAGGAAATACTTCACGCTTTTTGAACCATAGCTGTGACCCCAACTGTGTTTTGGAAAAGTGGCAAGTTGATGGTGAAACACGTGTGGGTGTATTTGCTGCTCGTTCAATAGAAGCTGGAGAGCCATTAACATATGATTACAGATTTGTGCAATTTGGTCCAGAGGTTAGATGCAACTGTGGTGCAGTAAATTGTCAAGGCTTTCTAGGGACGAAAAAGAAAATCGGTAAGCTAGATCTCTGTTGGGGTTCTAAACGCAAGCGAACATCAAATGCTTGCATTACGCTGGTAACAGCTGTATGA 1386 0.4589 MPDLGNFSLSSTLTLSHCTSDVADAPVKTLPNAFASDPAFEPRVLKRTRGSLDRVKKPASHKAFQDRLKDPFSHPFLVGAPKMGECCICHHFIYPGEELLCSVRRCDARCHSECAKDSAGATSLKKYKCPQHVCFICKQKKHLRCVRCKIAFHNKCAPWPDAVRPLEDHPGLAVCWRHPSDWRLDRKPDASTSDISEVFYRLPLPFISEEFKIDSSWKDMDSKMEQPPPYVHIRRNIYLIKKKRSNVDDGAGCTSCSSTCSDDCVCRVQCISCSKACRCSENCNNRPFRKEKKIKIVKTEHCGWGVEAAETIDKGGFIVEYIGEVIDDALCEKRLWDMKYMGVQNFYMCEIRKDFTIDATFKGNTSRFLNHSCDPNCVLEKWQVDGETRVGVFAARSIEAGEPLTYDYRFVQFGPEVRCNCGAVNCQGFLGTKKKIGKLDLCWGSKRKRTSNACITLVTAV* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00591 461 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 181 IPR013083 -
Lapu9g00591 461 SMART PostSET_3 415 431 IPR003616 -
Lapu9g00591 461 ProSiteProfiles Post-SET domain profile. 415 431 IPR003616 -
Lapu9g00591 461 SMART set_7 292 415 IPR001214 GO:0005515
Lapu9g00591 461 Pfam SET domain 303 408 IPR001214 GO:0005515
Lapu9g00591 461 ProSiteProfiles AWS domain profile. 249 292 IPR006560 GO:0005634|GO:0042054
Lapu9g00591 461 ProSiteProfiles SET domain profile. 292 409 IPR001214 GO:0005515
Lapu9g00591 461 SUPERFAMILY SET domain 210 421 IPR046341 -
Lapu9g00591 461 CDD SET_ASHR3-like 293 431 - -
Lapu9g00591 461 PANTHER SET DOMAIN PROTEINS 63 449 - -
Lapu9g00591 461 FunFam Histone-lysine N-methyltransferase 206 441 - -
Lapu9g00591 461 Gene3D SET domain 204 446 IPR046341 -
Lapu9g00591 461 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 460 IPR025787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00591 Lapu-Chr9 6801456 6810791 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00591 273 430 C2H2 Transcription Factor Family AT2G23740 37.430 5.90e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu9g00591 SET 6.9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00591 - - gmx:100791481 808.52