Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00587 ATGGCGCAATTTGGGTGGTCTGAATTTTTGTGCATTGCCACTCTTTTGTTATGCAGCGGTTTTGCAACATCCTTTTCCTCGGACCCTCCGTTGCTCCAACAACAAAAGGACCAGGTTGGGAGGCTCCCTGGCCAAACCTTCAACATTAGCTTCGCACACTACGCTGGGTATATCACTGTCGAGGAGAAAGCTGGGAGAACACTCTTCTACTGGTTCATTGAGGCACTTGAAGATCCTCATTCCAAGCCCCTTGTTTTATGGCTCAATGGAGGACCTGGTTGTTCATCCATTGCTTACGGACAGTCAGAGGAAATTGGGCCCTTTCATATAAATTCAGATGGCAAGACTCTCAATCTCAATCCCTATTCATGGAACCGAGTTGCGAACATTCTTTTTCTTGACACTCCTGTTGGGGTTGGATTTTCATATTCAAATAACGGCTCCGACCTGCTGAACAATGGCGATAATAGAACAGCTGAGGACAATTTAGTATTTCTATTGAAGTGGTTTGAGCGTTTCCCTCAATATAGAAGAAACGACTTTTTAATTAGTGGTGAGAGCTACGCAGGGCATTACGTTCCTCAACTTAGCCAAGTTATTGTTAAGCACAACTCAGCTACTAAAGAAAATGCTATAAATCTGAAAGGTTTCATGGTAGGAAACGCTCTGACGGATGATTTTCATGATCAATTGGGGATGTTCGAGTTTATGTGGTCAAGTGGTTTGATTTCGGATCAGACATACAAGCTTTTGAACGTACTTTGTGATTTTCAGTCAGTTGAGCACCCATCACATTCATGTGAAAAAATTTGGGGAATTGCTGATAAAGAACTTGGAAATATAGACCCATACAGTATTTTTACACCAACATGCCATGCCAATATTAGTCAGTTAAGCGGGCTGGTGAGAAGAAAGAATAGAATTGGTAGACTCGGTCTCAGTACAGAGTATGATCCATGCACTGAAAGGCACTCCACTGTATACTTCAATCGACCTGAGGTCCAAACAGTTCTTCATGTTGATCCAGATCATAAGCCTGCTACATGGGAGACCTGCAGTGATCTGGTAAATACAAACTGGAAGGATTCTCCAAGATCAGTGCTCAATACTTATCATGAACTTATTGACACGGGATTGAGGATATGGGTGTTCAGTGGTAATACGGACACGGTAATACCTGTCACGTCTACTCGCTATAGCATAAATGCTCTCAAGCTACCTACTGTGAGTCCTTGGCGTGCATGGTATGATGATGGGGAGGTTGGAGGATGGACTCAAGAATATTCTGGCCTCACGTTTGTGATTGTAAGGGGTGCAGGGCATGAAGTTCCTTTGCATAAGCCAAAACTTGCTCTAACACTGTTCCAATCCTTCTTAGCAGGAACATCAATGCCCAATCTTGAGTTAGTCACTGCCTCTTGA 1422 0.4332 MAQFGWSEFLCIATLLLCSGFATSFSSDPPLLQQQKDQVGRLPGQTFNISFAHYAGYITVEEKAGRTLFYWFIEALEDPHSKPLVLWLNGGPGCSSIAYGQSEEIGPFHINSDGKTLNLNPYSWNRVANILFLDTPVGVGFSYSNNGSDLLNNGDNRTAEDNLVFLLKWFERFPQYRRNDFLISGESYAGHYVPQLSQVIVKHNSATKENAINLKGFMVGNALTDDFHDQLGMFEFMWSSGLISDQTYKLLNVLCDFQSVEHPSHSCEKIWGIADKELGNIDPYSIFTPTCHANISQLSGLVRRKNRIGRLGLSTEYDPCTERHSTVYFNRPEVQTVLHVDPDHKPATWETCSDLVNTNWKDSPRSVLNTYHELIDTGLRIWVFSGNTDTVIPVTSTRYSINALKLPTVSPWRAWYDDGEVGGWTQEYSGLTFVIVRGAGHEVPLHKPKLALTLFQSFLAGTSMPNLELVTAS* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00587 473 FunFam Carboxypeptidase 317 464 - -
Lapu9g00587 473 FunFam Carboxypeptidase 367 461 - -
Lapu9g00587 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Lapu9g00587 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 431 444 IPR001563 GO:0004185|GO:0006508
Lapu9g00587 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Lapu9g00587 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Lapu9g00587 473 Gene3D - 367 461 - -
Lapu9g00587 473 SUPERFAMILY alpha/beta-Hydrolases 40 464 IPR029058 -
Lapu9g00587 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 448 IPR001563 GO:0004185|GO:0006508
Lapu9g00587 473 Pfam Serine carboxypeptidase 43 460 IPR001563 GO:0004185|GO:0006508
Lapu9g00587 473 Gene3D alpha/beta hydrolase 33 293 IPR029058 -
Lapu9g00587 473 FunFam Carboxypeptidase 33 293 - -
Lapu9g00587 473 ProSitePatterns Serine carboxypeptidases, histidine active site. 431 448 IPR033124 GO:0004185
Lapu9g00587 473 ProSitePatterns Serine carboxypeptidases, serine active site. 183 190 IPR018202 GO:0004185
Lapu9g00587 473 Gene3D - 320 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00587 Lapu-Chr9 6754073 6761861 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00587 378 464 Calmodulin-binding Proteins AT2G22960 28.409 5.48e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00587 K16297 - gmx:100805227 831.632