Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00576 ATGGTGCACACAAGGAAGTTCAGAGGTGTCAGACAGCGCCATTGGGGTTCTTGGGTCTCAGAAATTCGCCACCCTCTTCTCAAAAGGAGGGTGTGGCTAGGGACGTTTGAAACAGCAGAAGAAGCAGCACGAGCATACGACCAAGCTGCGATACTGATGAGTGGGCGAAACGCGAAAACCAATTTTCCAATGATTCAGACTCCTGAAGGTGATCCGAAGACGCTAACACCCACCAGCGAGACCCCATCAACCTCAAAGGAACTAGAAGAGATTCTTCATGCAAAGCTTCGAAAGTGTGGGAAGCTTCCATCTCCTTCCATGACTTGCTTGAGGCTCGACCCTGAGAACTCCCACATCGGAGTGTGGCAGAAGCGTGCGGGTCAGCGTTCTGACTCAAACTGGGTAATGATGGTTCCGTTCGGAAAGAAGAGTGACGAAGGTGGCAATAGTTCTCTGCCAAATAATTCCTCTGATTCGTTTTCAAAGTGTGATCATCAGACTCAACAAGTTGGAAGACAAGAGCTTGTGAGAACAGAGATGGAGGAAGAAGAGAGAATGGCACTGCAAATGATAGAAGAACTCCTCAGCAGAAACTGGCCCACAAGCCCTTCATTGAATAACATATATTAA 630 0.481 MVHTRKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPMIQTPEGDPKTLTPTSETPSTSKELEEILHAKLRKCGKLPSPSMTCLRLDPENSHIGVWQKRAGQRSDSNWVMMVPFGKKSDEGGNSSLPNNSSDSFSKCDHQTQQVGRQELVRTEMEEEERMALQMIEELLSRNWPTSPSLNNIY* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00576 209 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Lapu9g00576 209 MobiDBLite consensus disorder prediction 147 169 - -
Lapu9g00576 209 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Lapu9g00576 209 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Lapu9g00576 209 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Lapu9g00576 209 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 5 158 - -
Lapu9g00576 209 MobiDBLite consensus disorder prediction 62 84 - -
Lapu9g00576 209 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Lapu9g00576 209 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Lapu9g00576 209 MobiDBLite consensus disorder prediction 139 169 - -
Lapu9g00576 209 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Lapu9g00576 209 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Lapu9g00576 209 CDD AP2 6 63 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00576 Lapu-Chr9 6614797 6616242 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00576 1 198 AP2-EREBP Transcription Factor Family AT1G15360 59.314 1.83e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu9g00576 AP2 1.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00576 - - gmx:100779921 301.212