Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00571 ATGGATGGGAACAAGGACGACGCGTTGAAATGTTTGAGAATCGGCAAAGAAGCGTTAGAAAACGGCGATCGTTCACGCGCGTTGAAGTTCGTGACGAAGGCGCGCCGCCTGGATCCCACGCTCCCCGTCGACGATCTATTGTCCACGATAGAGGCGGACACAGGGGATCAGCCGCCTGCCGCCGAGGCAGCGGCGGAACCTATCAAGCACCCCGATCAGCCTTCTCTCCGGCGAAGGGCCGCTACCTCGGCGGGCCCGGGGGGGTCCTCCTCCGCCTCGTCCTCTTCGGTCACGTATACCGAAGAGCAAGTTTCAATTATCAGAGAAATTAAGAGAAAGAAAAACTTTTATGAGATATTGGGATTAGAGAAAAGTTGCACTGTTGAGGATGTGAGGAAATCTTATAGGAAACTGTCCCTTAAGGTTCATCCCGACAAGAACAAAGCCCCTGGCGCTGAGGAAGCATTCAAGGCTGTGTCAAAGGCGTTTCAGTGCCTGAGCAATGAAGAGAGTAGGAGGAAGTATGATGCTTCCGGTGAAGATGAATCGGTTTACGAGCAGCGTGCCGCAAGGCCAGCCGCAAGGGGTTATAATGGTTACTATGAGGCTGATGTTGATGCTGAAGAGATATTTAGAAACTTCTTCTTTGGAGGAATGGCCCCTGCAGCCAATTTTGGAGGATTCAGTTTTGGACCAGGTGGTTTCAATGGTTTCAATGGTCACAGGCCTGCTGAACACGCTTCTGGTGGTTTTAATGTTCGTGCTTTGATCCAGTTGCTGCCGGTGCTACTGATTTTGCTACTAAACTTTTTGCCTTCTTCGGATCCCTTGTACTCACTGTCGAAGAGCTATCCTTATGAACATCGGTTTACTACACCTAAGGGTGTTAACTATTATGTCAAGTCTACAAAGTTTGCTCAGGAGTATCCGCCGGAGAGCGAGGAACGAGCAACACTTGAAGAAAGGGTGGAGAGGGAGTACTTTGGCGTACTCCGCCAGAATTGTCATTTCGAGTTGCAGCGCCGCCAATGGGGGTATATCCGGGAAACGCCGCACTGTGATATGCTGCGGAAGTTTGATTTGGTGAATTGA 1092 0.5055 MDGNKDDALKCLRIGKEALENGDRSRALKFVTKARRLDPTLPVDDLLSTIEADTGDQPPAAEAAAEPIKHPDQPSLRRRAATSAGPGGSSSASSSSVTYTEEQVSIIREIKRKKNFYEILGLEKSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNEESRRKYDASGEDESVYEQRAARPAARGYNGYYEADVDAEEIFRNFFFGGMAPAANFGGFSFGPGGFNGFNGHRPAEHASGGFNVRALIQLLPVLLILLLNFLPSSDPLYSLSKSYPYEHRFTTPKGVNYYVKSTKFAQEYPPESEERATLEERVEREYFGVLRQNCHFELQRRQWGYIRETPHCDMLRKFDLVN* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00571 363 MobiDBLite consensus disorder prediction 51 98 - -
Lapu9g00571 363 PRINTS DnaJ domain signature 171 190 IPR001623 -
Lapu9g00571 363 PRINTS DnaJ domain signature 117 135 IPR001623 -
Lapu9g00571 363 PRINTS DnaJ domain signature 151 171 IPR001623 -
Lapu9g00571 363 PRINTS DnaJ domain signature 135 150 IPR001623 -
Lapu9g00571 363 ProSiteProfiles dnaJ domain profile. 115 179 IPR001623 -
Lapu9g00571 363 Pfam Domain of unknown function (DUF1977) 272 343 IPR015399 -
Lapu9g00571 363 SUPERFAMILY Chaperone J-domain 111 231 IPR036869 -
Lapu9g00571 363 PANTHER AT29763P-RELATED 1 358 - -
Lapu9g00571 363 Pfam DnaJ domain 115 176 IPR001623 -
Lapu9g00571 363 SMART dnaj_3 114 171 IPR001623 -
Lapu9g00571 363 FunFam Chaperone protein dnaJ 49 111 226 - -
Lapu9g00571 363 CDD DnaJ 115 168 IPR001623 -
Lapu9g00571 363 ProSitePatterns Nt-dnaJ domain signature. 156 175 IPR018253 -
Lapu9g00571 363 Gene3D DnaJ domain 111 225 IPR036869 -
Lapu9g00571 363 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00571 Lapu-Chr9 6534114 6536360 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00571 110 177 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.278 1.49e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00571 K09518 - gmx:100788812 585.874