Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00531 ATGGAAGAAGAAGAGTTCAAAGTTATGGGAAAGGGGTGCAAGGAAACTCCCGTTCGACTATATGCTGATGGGATTTATGATCTCTTTCACTTCGGCCATGCCCGTTCTCTTGAGCAAGCCAAGAAACTGTTTCCAAACACTTATCTCCTTGTTGGATGCTGCAATGATGAGATCACCCATAAGTATAAGGGCAAAACTGTTATGACTGAGAAGGAACGTTGTGAGTCTCTTCGCCACTGCAGGTGGGTTGATGAAGTTATTCCAGATGCACCATGGGTAATCACCGAGGAGTTCCTTGACAAGCATCAAATTGACTATGTGGCACATGATAGTCTTCCTTATGCTGATGCAAGTGGAGCTGGAAAGGATGTGTATGAATACGTTAAGTCTGTTGGAAAATTTAAGGAAACACAGCGGACTGAAGGAATTTCTACTTCTGATATTATAATGAGAATAATCAAAGATTATAATCAATATGTAATGCGTAATTTGGACCGGGGTTATACGAGAAAGGAGCTAGGTGTCAGCTATGTCAAGGAGAAGAGGTTGAGAATGAACATGGGACTTAAAAAATTGCAGGAGAGAGTGAAGAAACAACAAGAGAAAGTGGGAAAGAAGATTCAAACGGTGGGAAAAATTGCTGGAATGCACCCTAATGAATGGGTTGAAAATGCAGATCGATTGGTAGCTGGATTTCTTGAGATGTTTGAAGAAGGCTGCCATAAAATGGGAACAGCAATCAGAGACAGAATACAAGAACGATTAAGGGCACAACAGCTGAAATCTCTTCTTTATGATGAGTGGGATGATGATGATGCATTTTATGATGATGAATACTACACCGACTAA 849 0.4087 MEEEEFKVMGKGCKETPVRLYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDEITHKYKGKTVMTEKERCESLRHCRWVDEVIPDAPWVITEEFLDKHQIDYVAHDSLPYADASGAGKDVYEYVKSVGKFKETQRTEGISTSDIIMRIIKDYNQYVMRNLDRGYTRKELGVSYVKEKRLRMNMGLKKLQERVKKQQEKVGKKIQTVGKIAGMHPNEWVENADRLVAGFLEMFEEGCHKMGTAIRDRIQERLRAQQLKSLLYDEWDDDDAFYDDEYYTD* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00531 282 Gene3D HUPs 3 238 IPR014729 -
Lapu9g00531 282 Pfam Cytidylyltransferase-like 21 150 IPR004821 GO:0003824|GO:0009058
Lapu9g00531 282 PANTHER CYTIDYLYLTRANSFERASE 13 273 IPR045049 GO:0004105|GO:0006657
Lapu9g00531 282 Coils Coil 182 209 - -
Lapu9g00531 282 NCBIfam cytidyltransferase-like domain 21 86 IPR004821 GO:0003824|GO:0009058
Lapu9g00531 282 FunFam Choline-phosphate cytidylyltransferase 2 1 238 - -
Lapu9g00531 282 CDD CCT 17 167 IPR041723 -
Lapu9g00531 282 SUPERFAMILY Nucleotidylyl transferase 19 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00531 Lapu-Chr9 6101189 6107109 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00531 44 280 Acyl Lipid Metabolism Gene Families AT2G32260 78.333 2.25e-133 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00531 K00968 - gmx:100786249 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00531 9 6101189 6107109 Lapu9g00531 9 6101189 6107109 ECH