Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00523 ATGGTCTTCTCAACTGCTTTTCTCCACGAAGGTGGCCCCTTTTATTCTAGAAAAAGGCCGAGAGTATTAGATCTTGGACATCAAGATATAGATTTGCAGGCAGATGCAGGAATTTCCAGTGATTTTTCCTTCTTTTCCTCGGATCAAAATATAGAAAGGTGCACTAGTACCAGTGATGTTCCCTCTTCCAGTAACACTGACGATAAAGACCCAGGTTCTGGAATGGAGATGAGCTGTCCGTCAAATGTTAATAGTGGCTATGTTCCTGTGTGTTCTACCACAGGGACTATATCTCACATGGACCAGAGTTTCTGTGGCTATGTGCAACAGCCTGCTTTAGTGAGTGGATGGATGTATGTGAATGAAAATGGGCAAATGTGTGGTCCCTATATTAAGGAGCAGTTATATGAGGGTCTAACTACTGGTTTCTTGCCATCTGAGCTTCCTGTGTATCCTGTGATTAATGGCACTATAACGAACCCTGTACCACTGAATTACTTCAAGCAGTTTCCTGATCATGTTTCCACTGGTTTTGCTTATCTGATTATGGGTATCTCCGGCACAAGGATGCCTACAATGGCAGTATATGAACAAGATAGATCTTTTGAGCTTGCTGCTCCTCTGGCTGGTAATCTGGATTCACAGTCAGTTTCACATTCGCATGCCAATTACTGCATTAAGGAATCCAATTACTTAAGTCCACACTCGGAGGCATTAGACAGTTTAATATCTTGTCAGATGTTACGTAAAGAATGCTGTTGGCTTTATGAGGATGAGAAGGGTATGAAACGTGGGCCACATTCCATCGATGAATTGATTTCCTGGCACAGTCATGGACATCTTAAAGATTCAACTGTGATCTTCCATTCTGATAAGAAGTATGACACCTTTGTGTTATTGTCTGTTGTCAATGCATTAAAAGGAGATACCACTGGAACCATTTATAGATCAGGTTCTACAAGTACTGAGGTTGGTGATATGGTACACTTGATTAGTGAAATATCTGAGAACATTTCTTCCCAATTGCACATGAGTATCATGAAAGCTGGTCGCAGAGTTGTGGTAGATGGAATTATTGGTGATATTATTGCTGAATATGTTACGGAAAAGAAATGTAGGAGGCATAAGCTTGAATCAGCTGCCCAGACTCCTGAAATCAAGATGTCTAAGTTTTCTGTGGAGGTCAGTAACGGTTCTGCTATTCCCAGTGATCCTTCTACATCCCATATTTTTGATGATCAGGCTTGTCATGAAAGTTCCAGGTTGCCCTCAGCCAGTTGTAAATCAGTTGGAAGTGTTGAGAATTTTTGGTGGTCATATGCTGTTGTTCGCAAGGTTCTTCTTGATTATTGCATGCAAGTAATGTGGAATGCTGTGTTTTTTGATACAATAGCAGATTACTTGTCTTCTTGGAGGAAGAGTAAGATTTGGTCTCATCCTAAACCTCGACCATCTACTAACGGATTTAAATATAATGCTGAAAAGATTGAATCAGAAGCTTTGGTTCTCAAGCGAGATTCCTGTGAAAGCAATTCTGATGTCTATAATCAGTTTGGAGTATTGGCAACAAAAACAAATCATCCTCAGTTATTTTGTTCTCCTAGTAGGTTCACAGGTGGAAACTTACTAAAAGGTCAAAGTGTTTCTTCTCCTAAAGATTTGACATTCATTCTTGAAAGTGTGGAGAATGAGCTTCACTTCTCTTCAAAGTCATCCTTTGCTAATTACATACGACTTTTTGTTGAGAATGAAGTGAACAAAATAGTTCCTTTCCCAGAAAAAAACAAATTAAATGAGGTTGCTGTTAGTGATACTTGTTTTTCAGATATACTTGCTGACAAAACGTCTGTGAAGGGAACTCCAATTGACAAGTTTGCATCTGGAAACCTCATGTCTGATATATTTTCAAAAGCATTTATGGAGTTATGTGGATATGAGGACGATTTGGTGGAAGAGGAGATTGATGACCTACCCCCTGGAATTGAAGAGAAATCTCAACCAGTTGTCGTACACTTCAATTCAAAATTTCGACCTTCAAGGTTGGTTGAATGTCGTCCTAAGATTACAGAATATGTTGCAACTGCACTGTGCCGACAGAAACTGCACGATGAAGTTCTGGAAGAGTGGAAGTCGCTGTTTCTTGAATCTGTGGTCTATCAAGATTTTATATCATCAAGTACCATAAAGAAACATTTTAAGTCTGATGGTCATGAGAAAGGAGAAATGTTCAATGCAAGCAAGGAACATTTGAATGGTGCTACTTCTGGACTTGGAAGAGTGAGGGAAGAAACAAAGAGTTCTTCTGAGGTTTGTCTGGTGATTGCAAAGAATACTTATTGCCGCAAGAAGCTGTCACGGAAGGAGTTAGTTTCCTCACAGTCTGTAGCAGAAAATGATTCCAGGCCAGGGAAGAAGCCCGTGACCAAGTTGAGGAAACTTGTTTGTGGAGATGTTGGTGAGGCTGTTGAGGTTAAAATAGCTTCTGTTAAACGTGGAAAGACAAAGAAGATTAAAGGGAAGAAGGAGTCATGTTCTAAGGGCAGGTCTTGTGTCATTGTTAATGGTAGCTCACATAGTGAACAATTATCTTTAAAGAATAAAGCTGGTCAGAAAGTGTTGAAGTTTTCAGAGAATGTTAAGGATGTTGTGAAATCCACTGTGAAGAAGCTTTCAGTGTCAACTGATAATAGTGTTGGTGTGAAGAAGGTTGTCAAAAGTGATGGCACTGTTAAAGAGAAAACCACAGGTCATTGCTCGAGAGAGATTCAAAGTGCAACGAATAAAGCATCAAAATCAAAAAGGAAACATCAAATGGATGGTACAACATCTTCACATCCCACAAAGATTTTGAAAATTTCAAATGGTGGTGCTTATCTGGGAGCCAGTAAACAAGTTACCGTGGAAAGGACGAACTCCAGAAAATCCAAACAATTGAATTTGTGTCCTAAATCTGATGGATGTGCTAGGACTTCTATTGATGGTTGGGAATGGCATAAGTGGTCTAGAAGTGCCAGTCCTGCAGATAAAGCACGTGTTAGGGGCCTTCCATGTGTCCAGAACAAGAGCATATATTCTGAAAATAATCTATCTCAGTTGCCCAATGGCAAGGGTCTTTCTGCAAGAACAAATAGAGTGAAATTGCGTAACCTTCTTGCTGCTGCAGAGGGTGCAGATCTTCTGAAAGTGCCTCAATTGAAGGCGCGGAAGAAGCGTTTACGTTTTCAAAGGAGCAAAATCCACGACTGGGGGCTTGTTGCCTTGGAGCCAATTGAGGCAGAGGACTTTGTGATTGAATATATTGGACAACTAATTCGTCCTCAGATATCAGATATACGGGAACGTCAATATGAGAAGATGGGAATTGGAAGCAGTTACCTTTTTAGACTTGATGATGGTTATGTGGTTGATGCTACAAAGAGAGGTGGGATTGCAAGATTTATTAACCACTCATGTCAGCCCAACTGCTATACAAAGGTTATATCTGTTGAGGGTCAAAAGAAGATTTTCATATATGCAAAGCGACCTATAAAAGCTGGTGAAGAAATAACATACAATTATAAGTTCCCCTTGGAGGAGAAAAAGATTCCCTGTAACTGTGGGTCCAGAAAGTGTCGGGGATCATTGAATTAG 3630 0.4014 MVFSTAFLHEGGPFYSRKRPRVLDLGHQDIDLQADAGISSDFSFFSSDQNIERCTSTSDVPSSSNTDDKDPGSGMEMSCPSNVNSGYVPVCSTTGTISHMDQSFCGYVQQPALVSGWMYVNENGQMCGPYIKEQLYEGLTTGFLPSELPVYPVINGTITNPVPLNYFKQFPDHVSTGFAYLIMGISGTRMPTMAVYEQDRSFELAAPLAGNLDSQSVSHSHANYCIKESNYLSPHSEALDSLISCQMLRKECCWLYEDEKGMKRGPHSIDELISWHSHGHLKDSTVIFHSDKKYDTFVLLSVVNALKGDTTGTIYRSGSTSTEVGDMVHLISEISENISSQLHMSIMKAGRRVVVDGIIGDIIAEYVTEKKCRRHKLESAAQTPEIKMSKFSVEVSNGSAIPSDPSTSHIFDDQACHESSRLPSASCKSVGSVENFWWSYAVVRKVLLDYCMQVMWNAVFFDTIADYLSSWRKSKIWSHPKPRPSTNGFKYNAEKIESEALVLKRDSCESNSDVYNQFGVLATKTNHPQLFCSPSRFTGGNLLKGQSVSSPKDLTFILESVENELHFSSKSSFANYIRLFVENEVNKIVPFPEKNKLNEVAVSDTCFSDILADKTSVKGTPIDKFASGNLMSDIFSKAFMELCGYEDDLVEEEIDDLPPGIEEKSQPVVVHFNSKFRPSRLVECRPKITEYVATALCRQKLHDEVLEEWKSLFLESVVYQDFISSSTIKKHFKSDGHEKGEMFNASKEHLNGATSGLGRVREETKSSSEVCLVIAKNTYCRKKLSRKELVSSQSVAENDSRPGKKPVTKLRKLVCGDVGEAVEVKIASVKRGKTKKIKGKKESCSKGRSCVIVNGSSHSEQLSLKNKAGQKVLKFSENVKDVVKSTVKKLSVSTDNSVGVKKVVKSDGTVKEKTTGHCSREIQSATNKASKSKRKHQMDGTTSSHPTKILKISNGGAYLGASKQVTVERTNSRKSKQLNLCPKSDGCARTSIDGWEWHKWSRSASPADKARVRGLPCVQNKSIYSENNLSQLPNGKGLSARTNRVKLRNLLAAAEGADLLKVPQLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYIGQLIRPQISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCQPNCYTKVISVEGQKKIFIYAKRPIKAGEEITYNYKFPLEEKKIPCNCGSRKCRGSLN* 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00523 1209 ProSiteProfiles SET domain profile. 1070 1187 IPR001214 GO:0005515
Lapu9g00523 1209 SMART PostSET_3 1193 1209 IPR003616 -
Lapu9g00523 1209 SUPERFAMILY GYF domain 249 301 IPR035445 -
Lapu9g00523 1209 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 9 1209 IPR044570 GO:0042800|GO:0051568
Lapu9g00523 1209 ProSiteProfiles Post-SET domain profile. 1193 1209 IPR003616 -
Lapu9g00523 1209 SUPERFAMILY SET domain 1066 1206 IPR046341 -
Lapu9g00523 1209 CDD SET_SETD1 1058 1205 IPR037841 GO:0042800|GO:0048188
Lapu9g00523 1209 MobiDBLite consensus disorder prediction 914 948 - -
Lapu9g00523 1209 SMART set_7 1070 1193 IPR001214 GO:0005515
Lapu9g00523 1209 Pfam SET domain 1082 1186 IPR001214 GO:0005515
Lapu9g00523 1209 ProSiteProfiles GYF domain profile. 251 301 IPR003169 GO:0005515
Lapu9g00523 1209 MobiDBLite consensus disorder prediction 53 78 - -
Lapu9g00523 1209 Gene3D SET domain 910 1209 IPR046341 -
Lapu9g00523 1209 Gene3D - 243 328 IPR035445 -
Lapu9g00523 1209 Gene3D - 106 177 IPR035445 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00523 Lapu-Chr9 6007344 6029791 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00523 1069 1209 C2H2 Transcription Factor Family AT2G23740 36.810 9.27e-19 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu9g00523 SET 3.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00523 - - gmx:100805708 1882.07