Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00504 ATGGCTGAAGTGGGAACAGTAGGAAAGATTCATCATTTCAATCTGGTTCGACTCTACGGTTTTTGTTTGGAAAGAAACTTTACAGCACTGGTTTATGAGTACATGGGGAATGGTTCTCTTGACAAGTTTTTGTTTAATGCAGCCAAGGACATAGGTTTTGAAAAGCTTTATGAGATTGCAGTTGGGACAGCCAAAGGCATTTCTTACTTGCATGAAGACCAAACTATATGCAATAGAGAAAATACTCATATTACCTTGACTAGGGGTAGAGGGACTCCTGGTTATGCTGCACCTGAGCTTTGGTTGCCAAATTTTCCCGTAACTCAAAAGTGTGATGTTTATAGCTTTGGCATGCTGTTATTTGAAATCCTTGGAAGGAGAAGAAACTTTGACATTGACCTTGCTGAAAGCCAGGAGTGGTTTCCAATGTGGATTTGGAAAAAATTTGAGGCTGAAGAAGCAGAAGAATTAATGGTAGCGTGTGCGATAGAGGATCAAAATAAAGAGACTGCAGAAAGAATGGTGAAGGTAGCTCTGTCATGTGTTCAGTATAAGCAAGAACCAAGACCTATAATGAGTGTTGTGGTGAAAATGTTAGAAGGTTCAGTTGAAATTCCAAACCCTCTAAACCCTTTTCCCCACCTTATTCATGAGACTCTTCCACTGCCAGCATCACATACCAACACTTATACAAGTACAGTTCCAGATTCTTCAGGGATGGTAACAGAATCCAGCCTTGAACCTTCTTCTCTTACTGCGACTAAGTTCGAGATTGAATCAGCCTCTACCTAA 792 0.4053 MAEVGTVGKIHHFNLVRLYGFCLERNFTALVYEYMGNGSLDKFLFNAAKDIGFEKLYEIAVGTAKGISYLHEDQTICNRENTHITLTRGRGTPGYAAPELWLPNFPVTQKCDVYSFGMLLFEILGRRRNFDIDLAESQEWFPMWIWKKFEAEEAEELMVACAIEDQNKETAERMVKVALSCVQYKQEPRPIMSVVVKMLEGSVEIPNPLNPFPHLIHETLPLPASHTNTYTSTVPDSSGMVTESSLEPSSLTATKFEIESAST* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00504 263 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 73 IPR045874 GO:0004672
Lapu9g00504 263 SUPERFAMILY Protein kinase-like (PK-like) 2 233 IPR011009 -
Lapu9g00504 263 Gene3D Transferase(Phosphotransferase) domain 1 78 210 - -
Lapu9g00504 263 ProSiteProfiles Protein kinase domain profile. 1 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00504 263 Pfam Protein tyrosine and serine/threonine kinase 88 199 IPR001245 GO:0004672|GO:0006468
Lapu9g00504 263 Pfam Protein tyrosine and serine/threonine kinase 1 76 IPR001245 GO:0004672|GO:0006468
Lapu9g00504 263 Gene3D Transferase(Phosphotransferase) domain 1 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00504 Lapu-Chr9 5661014 5661897 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00504 3 221 Receptor kinase-like Gene Family AT5G38280 34.766 1.76e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Lapu9g00504 PK_Tyr_Ser-Thr 3.4e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00504 - - gmx:100819737 405.216