Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00503 ATGGAATGGACAGTTATAGCTTCCATTGCTTCTGGAGTGGTGGGACTGGTAGCTATTATAGCAATAGTATATGCCATCATTCAATGCTTAAAGAAGGCAGGAGAAGCAATTCCTGCATATGCCCAGCTTCCAAGTACAGAGAATGATCATAAAGCATCAAATGTATTTCCTTCAACTAGAGAAGTTGAAGTAGTAATAACACCAGCTTCCACAGTTCAACGTTCAAAAACTGAGTTTGCAACAATGGAAAGATTCCTAAGCAATATCAACAAGGAGAAACCCATCAGATTCTCTCCTGAGGAACTAGATATAATTACATGCAACTACTCAACCATATTGGGTTCAGGTGCTTTTGGGGTTGTATACAAAGGGGAATTGTCCACTGGAGATGAAGTGGCTGTCAAAGTTATCAACAGTTTGGACATGGGAATGGAAGAGCAATTAAAAGCAGAAGTTGGCACCCTTGGAAGAACTTACCATGTCAATCTAGTCAGGCTTTATGGCTTCTGCTTCCACCGAGATAAGAGAGCTCTTGTTTATGAGTATGTGGAAAATGGGTCTCTGGACAAGCACTTGTTTGGCAGCCAGAACCAAGACATTGACCTGGGGAAGCTTCTTGAGATTGCAATTGGAACAGCAAAAGGAATTGCTTATTTACATGAAGAGTGTCAAAAAAGAATAATTCATTATGACATTAAACCGGAGAATGTTCTTCTTGACATGAAGTTGGAACCAAAGGTAGCAGATTTTGGGCTTGCTAAGCTTTGCAGCAGAGAAAATAACGTTTCAGTAAACACACACTTCAGAGGAACAAGGGGATATGCTGCACCTGAAATGTGGAAGCCTTTTCCAGTGACTCACAAGTGCGACGTTTATAGTTTTGGCATTCTCCTCTTTGAAATGGTTGGGAGGAGAAGGCATTTTGATGATACCTATGGAGAATCACAACAATGGTTTCCACAATGGACATGGGATATGTTTGAGAATAATGAGTTATCTGTAATGCTTTCACTTTGTGGAATTGAAGAGAAACACAAGGAAAAAGGTGAGAGAATGTCAAAGGTGGCTCTGTGGTGTGTTCAGTATTCACCAGATGATAGACCTCTTATGAGTACTGTTGTGAAGATGCTAGAGGGTGAAATTGAAATTTCTCCACCTCCATTTCCCTTCCAACACCTGGTGTCTGATAAGCCAAATTTGACTCAACAATGGAGTAGTACTGCAGATTCAGATGCAACTAAGTCATGGGAAACAAAATCGTACCCTGAATATGGCTCCAAAATCAAGCGCAATACATTTGAGATCGAAGAACTTACTTAG 1320 0.4053 MEWTVIASIASGVVGLVAIIAIVYAIIQCLKKAGEAIPAYAQLPSTENDHKASNVFPSTREVEVVITPASTVQRSKTEFATMERFLSNINKEKPIRFSPEELDIITCNYSTILGSGAFGVVYKGELSTGDEVAVKVINSLDMGMEEQLKAEVGTLGRTYHVNLVRLYGFCFHRDKRALVYEYVENGSLDKHLFGSQNQDIDLGKLLEIAIGTAKGIAYLHEECQKRIIHYDIKPENVLLDMKLEPKVADFGLAKLCSRENNVSVNTHFRGTRGYAAPEMWKPFPVTHKCDVYSFGILLFEMVGRRRHFDDTYGESQQWFPQWTWDMFENNELSVMLSLCGIEEKHKEKGERMSKVALWCVQYSPDDRPLMSTVVKMLEGEIEISPPPFPFQHLVSDKPNLTQQWSSTADSDATKSWETKSYPEYGSKIKRNTFEIEELT* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00503 439 ProSiteProfiles Protein kinase domain profile. 107 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00503 439 Pfam Protein kinase domain 111 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00503 439 Gene3D Phosphorylase Kinase; domain 1 58 182 - -
Lapu9g00503 439 FunFam Putative receptor-like protein kinase 183 385 - -
Lapu9g00503 439 SUPERFAMILY Protein kinase-like (PK-like) 90 378 IPR011009 -
Lapu9g00503 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Lapu9g00503 439 PANTHER OS07G0415500 PROTEIN 76 390 - -
Lapu9g00503 439 ProSitePatterns Protein kinases ATP-binding region signature. 113 135 IPR017441 GO:0005524
Lapu9g00503 439 Gene3D Transferase(Phosphotransferase) domain 1 183 384 - -
Lapu9g00503 439 SMART serkin_6 107 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00503 Lapu-Chr9 5656678 5658805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00503 96 427 Receptor kinase-like Gene Family AT5G38280 39.233 3.52e-78 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Lapu9g00503 Pkinase 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00503 - - gmx:100820269 699.123