Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00502 ATGTCAAATAGCGCTGCAGTAATTGGGGCTATAATCATCCTTGCGGTGATTTTGGTGAAAATAGGTATTTTGATTTGTGTGTGCAGAAAAAGAAATCAGATAGATGATAGACCAGTAGGTTCAGGTTCAAAGTTTCTTACTCTCACTATGGATAAATTTCTTAATGACATGGAAAGGGAGAAGCCAATCAGATTCACTGATCAACAACTAAGGATTGCAACTGATAACTACTCTAACTTGTTGGGGTCAGGAGGTTTTGGATCAGTTTATAAGGGAATTTTTAGTAATGGGACCATGGTTGCTGTGAAGGTTCTGCGAGGGACTTCAGACAAGAAAATTGAGGAGCAGTTTATGGCAGAAGTGAGTACCATTGGCAGAATTCATCATTTTAATCTTGTTAGACTCTATGGATTTTGCTTTGAAAAAAACCTGATAGCACTGGTGTATGAGTACATGGGTAATGGCTCTCTTGATAGGTATTTGTTCCATGAAAAGAAGACCTTAGGATATGAAAAGCTTCATGAGATTGCAGTGGGAACAGCTAGAGGCATTGCTTATTTGCATGAAGAGTGCCTACACAGAATAATCCATTACGACATAAAACCAGGAAATATTCTCTTGGACAGGAATTACAATCCTAAAGTTGCTGATTTCGGTTTAGCCAAACTTTGCAACAGGGACAACACTCACATAACCATGACTGGGGGTAGGGGAACTCCAGGTTATGCTGCACCTGAGCTTTGGATGCCATTTCCTATAACTCCCAAGTGTGATGTTTATAGTTTTGGCATGCTGCTATTTGAAATCATTGGCAGAAGAAGAAACATTGATATTAAACTTGCTGAAAGCCAAGAGTGGTTTCCAATATGGGTTTGGAAAAAATTTGATACTGGACAACTGGGGGAGCTGATAATAGTCTGTGGTATAGAGGAGAAAACTAAGGAGATTGCAGAAAGAATGATTAAGATAGCTTTGTGGTGTGTTCAGTATAGGCCGGAATTAAGGCCCATAATGAGTGTTGTGGTGAAAATGCTGGAAGGTTCAGTGGAAATTCCAGAACCTGACAACCCGTTTCAGCATTTCATGGGTGGGATTAGCATTGCTCATCCAGTTCCTATGTCACAGACCTATAATACAACAACTATTTCATCTGGGTCTTCTGTTATGAATATTTTCAGGAACATGGAAAGAGAAAAGCCAATCAGGTTTACTGGTGAGCTGCTCAGGATTGCAACAGATAATTACTCTACATCATTAGGGTCAGGAGGTTTCGGAGAGGTTTATAAAGGAAATTTAAGTGATGGAACAACTGTGGCTGTGAAGGTTCTACGTGGAAATTCTGATAAGAGAATTAAGGAACAGTTTATGGCAGAAGTGGGTACAATTGGAAAAATTCATCATTTCAATCTAGTTAAGTTGTATGGATTTTGCTTTGAAAAAGACCTGAGAGCACTGGTTTATGAGTACATGAGGAATGGATCTCTTGACAAGTATCTGTTTCACGAAAACAAGACCCTAGGATACGAAAAGCTTCATGAGATTGCAGTTGGGACAGCCAGAGGCATTGCATACTTGCATGAAGATTGTCAACAAAGAATAGTCCACTATGACATCAAACCAGGAAATATTCTCTTGGACAACAACTTTAATCCTAAAGTTGCTGATTTTGGATTAGCTAAACTCTGCAACAGGGACAATACTCATATAACCATGACAGGAGGTAGGGGTACTCCTGGTTATGTTGCACCTGAGCTTTGGATGCCATTTCCTGTGACTCACAAGTGTGATGTTTATAGCTTTGGAATGTTGTTATTCGAAATCATAGGCAGGAGAAGAAACCTTGACATTAACCTTCCCGAAAGCGAAGAGTGGTTTCCAGTATGGGCTTGGAAAAGATTTGATGGTGGAGAATTGGAAGTGTTAATAAATGCTTGTAAGATTGAGGAGAGGTATATGAAAATGGCTGAAAGAATGGTGAAGGTAGCTTTGTCTTGTGTTCAATATAGGCCAGAATCAAGGCCAATTATGAGTGATGTGGTGAAAATGTTGGAAGGTTCAGTAGAAATTTCTAAACCATCTAACCCGTTTCAGCATATGATAGATGGAACTTTTCAGGGTCATTCTGTCCATGCATCCCCAACTGATGTTAATACAAGTATCAATTCCAGCTCTTCTTTTATGGTAATCGAACCATGA 2196 0.3944 MSNSAAVIGAIIILAVILVKIGILICVCRKRNQIDDRPVGSGSKFLTLTMDKFLNDMEREKPIRFTDQQLRIATDNYSNLLGSGGFGSVYKGIFSNGTMVAVKVLRGTSDKKIEEQFMAEVSTIGRIHHFNLVRLYGFCFEKNLIALVYEYMGNGSLDRYLFHEKKTLGYEKLHEIAVGTARGIAYLHEECLHRIIHYDIKPGNILLDRNYNPKVADFGLAKLCNRDNTHITMTGGRGTPGYAAPELWMPFPITPKCDVYSFGMLLFEIIGRRRNIDIKLAESQEWFPIWVWKKFDTGQLGELIIVCGIEEKTKEIAERMIKIALWCVQYRPELRPIMSVVVKMLEGSVEIPEPDNPFQHFMGGISIAHPVPMSQTYNTTTISSGSSVMNIFRNMEREKPIRFTGELLRIATDNYSTSLGSGGFGEVYKGNLSDGTTVAVKVLRGNSDKRIKEQFMAEVGTIGKIHHFNLVKLYGFCFEKDLRALVYEYMRNGSLDKYLFHENKTLGYEKLHEIAVGTARGIAYLHEDCQQRIVHYDIKPGNILLDNNFNPKVADFGLAKLCNRDNTHITMTGGRGTPGYVAPELWMPFPVTHKCDVYSFGMLLFEIIGRRRNLDINLPESEEWFPVWAWKRFDGGELEVLINACKIEERYMKMAERMVKVALSCVQYRPESRPIMSDVVKMLEGSVEISKPSNPFQHMIDGTFQGHSVHASPTDVNTSINSSSSFMVIEP* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00502 731 FunFam Putative receptor-like protein kinase 490 691 - -
Lapu9g00502 731 ProSitePatterns Protein kinases ATP-binding region signature. 419 441 IPR017441 GO:0005524
Lapu9g00502 731 ProSitePatterns Protein kinases ATP-binding region signature. 81 103 IPR017441 GO:0005524
Lapu9g00502 731 SMART serkin_6 75 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00502 731 SMART serkin_6 413 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00502 731 Gene3D Transferase(Phosphotransferase) domain 1 490 699 - -
Lapu9g00502 731 Gene3D Transferase(Phosphotransferase) domain 1 152 354 - -
Lapu9g00502 731 Pfam Protein kinase domain 79 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00502 731 CDD STKc_IRAK 81 347 - -
Lapu9g00502 731 ProSiteProfiles Protein kinase domain profile. 413 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00502 731 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 7 355 - -
Lapu9g00502 731 FunFam Putative receptor-like protein kinase 152 353 - -
Lapu9g00502 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Lapu9g00502 731 SUPERFAMILY Protein kinase-like (PK-like) 398 684 IPR011009 -
Lapu9g00502 731 ProSiteProfiles Protein kinase domain profile. 75 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00502 731 Pfam Protein tyrosine and serine/threonine kinase 416 683 IPR001245 GO:0004672|GO:0006468
Lapu9g00502 731 FunFam serine/threonine-protein kinase PBS1-like 384 489 - -
Lapu9g00502 731 Gene3D Phosphorylase Kinase; domain 1 50 151 - -
Lapu9g00502 731 Gene3D Phosphorylase Kinase; domain 1 388 489 - -
Lapu9g00502 731 CDD STKc_IRAK 419 685 - -
Lapu9g00502 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Lapu9g00502 731 FunFam serine/threonine-protein kinase PBS1-like 48 151 - -
Lapu9g00502 731 SUPERFAMILY Protein kinase-like (PK-like) 58 346 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00502 Lapu-Chr9 5642518 5654083 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00502 402 696 Receptor kinase-like Gene Family AT5G38280 43.791 1.65e-73 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Lapu9g00502 PK_Tyr_Ser-Thr 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00502 - - ecad:122594152 868.226