Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00500 GTGGATAAATTTTTGAACGATATGGAAAGGGAGTGGCCAATCAGGTTTACTGACCAACATCTAAGGATTGCAACTGATAACTACTCTTACTTGTTGGGGTCAGGAGGTTTTGGATCAGTCTACAAGGGAATTTTTAGTGATGGAACCATTGTGGCTGTGAAGGTTCTACATGGGCGTTCAGACAAGAGAAATGAGGAGCAGTTTATGGCAGAAGTGGGGACAATTGGCAAAATTCGTCACTTCAATCTGGTTCGGCTATATGGATTTTGCTTCGAAAGAAACTTGATAGCACTAGTTTATGAATACATGGGGAATGGTTCTCTTGAGAAGCATCTGTTTAATCAAAACAAGGCCATAGGATTTGGAAGGCTTCTTGAGATTGCAGTAGGGACAGCCAAAGGCATTGCTTATTTGCATGAAGAGTGCCAACAAAGAATAACACACTATGACATCAAACCC 459 0.4139 VDKFLNDMEREWPIRFTDQHLRIATDNYSYLLGSGGFGSVYKGIFSDGTIVAVKVLHGRSDKRNEEQFMAEVGTIGKIRHFNLVRLYGFCFERNLIALVYEYMGNGSLEKHLFNQNKAIGFGRLLEIAVGTAKGIAYLHEECQQRITHYDIKP 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00500 153 PANTHER OS07G0415500 PROTEIN 8 153 - -
Lapu9g00500 153 Pfam Protein tyrosine and serine/threonine kinase 31 150 IPR001245 GO:0004672|GO:0006468
Lapu9g00500 153 ProSiteProfiles Protein kinase domain profile. 26 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00500 153 Gene3D Transferase(Phosphotransferase) domain 1 103 153 - -
Lapu9g00500 153 FunFam serine/threonine-protein kinase PBS1-like 2 102 - -
Lapu9g00500 153 SUPERFAMILY Protein kinase-like (PK-like) 10 153 IPR011009 -
Lapu9g00500 153 Gene3D Phosphorylase Kinase; domain 1 4 102 - -
Lapu9g00500 153 ProSitePatterns Protein kinases ATP-binding region signature. 32 54 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00500 Lapu-Chr9 5640142 5640600 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00500 15 153 Receptor kinase-like Gene Family AT5G38280 42.553 8.08e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Lapu9g00500 PK_Tyr_Ser-Thr 2.3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00500 - - gmx:100803355 255.758