Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00490 ATGGGGGATCATAGCTTCCTTGTGATCTTTTCATCCTTGCTGCTTCTCATAATTTGTGCACAAACAAGCTTAGCTCAACTTACTCCTGGCTTCTATAGAAAGACATGCCCCAATGTGGAACGGTTGGTTCGTTCAGCTGTGGAGTTGAAGTTTCAGCAGACCTTTGTGACTGCCCCAGCCACTCTTAGACTCTTCTTCCATGATTGCTTTGTGAGGGGTTGTGATGCATCCATTTTGCTTGCATCTCCAAGTAATAAGGCAGAGAAAGATCATCCTGATGACATTTCACTTGCTGGGGATGGGTTTGACACTGTGGCTAAAGCCAAGGCAGCTGTTGATAGTGACCCTCAGTGCAGAAACAAAGTCTCTTGTGCTGATATACTTGCTCTGGCTACTAGAGATGTGATACATTTGGCTGGGGGACCATTTTATAGAGTTGAATTGGGAAGGCGTGATGGCAGAATCTCTACTATTTCCAGTGTTCAACGCCGTGCACATACAATTGGATTCTCTCACTGCAATCACTTCTCAAAACGGATCTACAATTTCAGCCCCAAAAGACTAATTGATCCAACACTAAACTCACAATATGCCTTCCAACTTAGACAAGCATGTCCTCTGAGAGTTGATTCTAGAATTGCCATAAACATGGATCCTGTCACACCCCAAAAGTTTGATAACCAATACTTCAAGAATCTGCAGCAAGGAAAGGGTCTATTCTCTTCTGATCAGGTCCTGGCTACAGATAAAAGGTCAAGGGGCACAGTCAACCTATTTGCATCAAATGAACTAGCTTTTAACAATGCTTTTGTTCAAGCTATTACTAAGATGGGAAGAATAGGTGTTCTAACAGGAAGAGAAGGGGAAATAAGGTTTGATTGCTTCAGGGTGAACTGA 897 0.4303 MGDHSFLVIFSSLLLLIICAQTSLAQLTPGFYRKTCPNVERLVRSAVELKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPSNKAEKDHPDDISLAGDGFDTVAKAKAAVDSDPQCRNKVSCADILALATRDVIHLAGGPFYRVELGRRDGRISTISSVQRRAHTIGFSHCNHFSKRIYNFSPKRLIDPTLNSQYAFQLRQACPLRVDSRIAINMDPVTPQKFDNQYFKNLQQGKGLFSSDQVLATDKRSRGTVNLFASNELAFNNAFVQAITKMGRIGVLTGREGEIRFDCFRVN* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00490 298 Pfam Peroxidase 44 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu9g00490 298 Pfam Peroxidase 165 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu9g00490 298 PANTHER - 9 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu9g00490 298 CDD secretory_peroxidase 26 297 IPR033905 GO:0004601|GO:0042744
Lapu9g00490 298 Gene3D Peroxidase, domain 2 165 277 - -
Lapu9g00490 298 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Lapu9g00490 298 Gene3D - 278 298 - -
Lapu9g00490 298 ProSiteProfiles Plant heme peroxidase family profile. 26 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu9g00490 298 FunFam Peroxidase 30 179 - -
Lapu9g00490 298 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu9g00490 298 PRINTS Plant peroxidase signature 272 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu9g00490 298 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu9g00490 298 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu9g00490 298 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu9g00490 298 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu9g00490 298 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu9g00490 298 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu9g00490 298 PRINTS Haem peroxidase superfamily signature 218 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu9g00490 298 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu9g00490 298 SUPERFAMILY Heme-dependent peroxidases 26 298 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lapu9g00490 298 Gene3D - 30 160 - -
Lapu9g00490 298 FunFam Peroxidase 161 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00490 Lapu-Chr9 5478962 5481079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00490 14 298 Peroxidase AT2G18980 67.937 2.22e-150 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00490 K00430 - gmx:100807430 511.146