Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00483 ATGCTGTATTTCTTTGTATCTTGTTTATTTCTTTGTGTGATGTTATACTTTGTCTTGTGGATATTTAAAAGACAGAAACCTGTTGAGGAAAAACTCACGTTAGACAACATCGCTCCTCAAATAAAGTATGATGTTTTTGTTAGCTTTAGGGGCGAGGACATCCGCGATGGGTTTCTCAGCCATTTGATTATGGATTTTGAAAGGAAGAAAATAAATGCCTTCGTAGATGATAAACTGGAGAGAGGAGATGAAGTATGGCCATCACTTGTTGGAGCAATTAAAGGGTCATCCATGTCATTGATCATATTCTCACAAGACTATGCTTCTTCTCGCTGGTGTTTAGAAGAACTTGTGACAATACTTGAATGTAGAGATAAATATGGACAGATTCTAGTCCCTGTTTTCTACAAAGTGGAACCTACAGATGTACGATATCAATCATCCAAGAGTTACCAAAATGCTTTTGCTAGGCATCAAAGAAAATATGAGACCAACAAGGTGCAAATCTGGAGAGATTCTTTGAATAAATCGGCTACAATCTCAGGAATTGCATCATCAAAATATCCGGTTGATGCTGAGCTAGTTAAAGAAATTGCGAAAGTTGTTTTGAGAAAGTTGGCTAAACCCTCGGTTAACTTTAGAAGATTGGTTGGAATTGACGAAAAAGTTGCAACTGTTGAATCTCTTATAGGAAAAAAACCAGAAGACACTCGTCTTGTTGGAATTTGGGGCATGGGTGGTATGGGCAAAACAACTCTCGTGGAAGAAGTGTTTAATAAACTGAAGTTTAAATATGATGCTACTTATTTTTTAGCCAATGAGAGAGATCAATCAAACAAACATGGAATAATTCCTTTGAAGAAAAGTATTTTTTCTAAACTATTAGGATATGAAGTGGATATTGACACACCAAATTCATTGCCTGAAGATATTGTTAGGAGAATTGGTTGTATGAAGGTTCTTATTGTTCTTGATGATGTGAATGACTTAGAACACCAAGAAAAATTATTGGGATCTCTTGATAACTTTGGATCAGGTAGTAGAATAATTGTAACAACTAGAAATAGACAAGTGCTTAAGGCTAACAAATTTGATGAGGAATACCAGCTTAGAAAATTTAGTTTTGATGAAGCACTTGAACTTTTCAATTTGAATGTCTTTAACCAAAGTGATCACCAAAGGGAGTACAATGAGCTTTCAGAAAGGGTAGTGAATTATGCACAAGGAGTTCCTTTAGTTGTTAAAGTTTTGGCTGGTCGTCTACGTGGAAACGAAAAGGAAGTATGGGAAAGTGAGTTAGACAGGCTTAAAACGATGCCTCTTAGAGAAGTTTATGATGTCCTAAAATGGAGTTATAATGATCTAGATCGTAAAGAGCAACAAGTTTTTCTAGATTTGGCATGTTTCTTTCTTAGATTGCGTAAATCAGTGAATGTGGGTTCTTTAAAATCATTATTGAAAGATAGAGAAAGCGATAATTCAGTTGTTGTTGATTTGAAAAGGCTTGAAGATAGAGCTCTTATAACAATTTCTAAGGATCACAGTTTACATGAAATGGCTTTGAAGGTTATTCAATGTGAGTCAAGTGAAGATAATGTTGTTTTCATGCATGATAGTGTACAAGAAATGGCTTGGGAAATTGTTCGTAGAGAGTCTAGCAGACCTGGAAGTCGTAGTCGATTGTGGGATGCTGATGATATTTATGAAGCATTGAAAAATAACAAGGGAAATGAGGTCATTAGAAGCCTACGAATTCAATTGTCAGCAATTAAGAAGCTAAAGTTAAGTCCTCAAATATTTGCCAACATGAGCATACTACAATTTCTGGAAATTTCTGGGAATTGCAATGATGATTTATTCCATCAACATTATATTCTTGCTGAAGGGCTTCAACTTTTGGCGACTGAGCTAAAATTTCTCTACTGGGAGAGTTACCCTCTTAAATCCTTGCCAGAAAATTTTTCTACCGAAAGACTTGTAATATTATCATTGCAGCAAGGCAGTGTGGAAAAGCTTTGGGATGGTGTGAAGAATTTGGTAAATTTAAGAGAACTTGACCTCAATAGTTCTAGCAAATTAAAGGAGATACCAGATTTATCAAAAGCCACAAATCTTGAAGTCTTGGATCTCATGTGTTGTTCCATGTTGAAAGCACTTCCTTCATCATTTGCTCATCAAAGCAAGCTTAGAATTTTAGATATAAGCTACTGCAACAAGCTTCAAACAATACCAGAGCTTCCTTTGTTACTAAAGACTCTAGATGTTAATAGTTGCAATTCTCTTCAAACTCTACCAGAATTTCCTATGTCCCTTGAAACTTTAGATGTTAGAAGTTGTAATTCTCTTCAAACTCTACCAGAGCTCCCCCTATCCCTTGAAACTCTAGACATAGAACTTTGCACTTCACTTGAAACTTTGCCAAAGCTTCCTTCATCCCTCAAGACTCTCAAAGCAACAAAATGTGAATCTCTTCAAATTCTACCGAAGCTCCCCTTAACCTTGAAAACACTAGAAGCCACACAATGTGAATCTCTTCAAACTCTACCAGAACTTCCCCAATTCCTTGAAACTTTAGATGTCAATGGTTGTAAATTTTTGCAAACTTTACCAAAGCTTCCCATGACCCTTAAAAATCTGGATGTTGGAGATTGTGAATCTCTTCAAACTATACCAAATCTTCCACTCTCCCTTGAAAGTCTAGATTTTAAAGGTTGTGAGTCTCTCCAAGCTTTACCAAAGTTTCCTCAATTCCTTAAAATCCTAAATATCAATGGTTGCAAATCTCTTCAAACTTTACCAGAGTTCCCCTTGTACCTTGAAACTCTAGATGTCAGAGGTTGTGAATCTCTTCAAACTTTACCCAAGTTTCCTATGTGCCTTAAATCTCTTGATGTTAGTGGTTGTATATCCCTTCAAACTTTACCTGAGCTTCCTCTATCTCTTGAGAGTTTAGATGTTAGAGGTTGTGAATGTCTTCAAGTTCTACCGAAACTTTCCCAATCCTTAGAAACTTTGGATGTTAGTGGTTGTGAATCTCTTCTAACTTTACCTGATCTTCAATTGTCCCCAAAATCTTTAGATGTCAAAGACTTTGAACCTCTCCCAACTTTACCAGAACTTCCCTTATCCCTTGAGACTTTAGAGGTAAGAGGTTGTGAATATGTTCAAGCAATAGTAGAACTTCCATTGATAGTTGAAACTCTAGATACAAAATTATGCATTTCACTAAAGAATGCAAAATTTCTTCCTTCATCTCTTAAAACACTACAAGTCACTAATTGTGAGTCTATTCAAACCTTACCTAAGCTTCCTCATTCCCTCATAGCACTAAATACCCAATATTGCTCTTTACTTCAAACACTACCTGAGCTTCCCCAGTCCCTTAAAACCCTAAATGTCACATGTTGTCAATCGCTTATAAGTCTACCTGAGCTTCCATTGTGCCTTGAAACTCTAGAAGTCACAAAATGTGAGTCTTTTCAAAATTTTCCAAAACTTCCCCGATTCCTTAAAACTCTAGATGTCAATGGTTGCATATCTCTTGAAACATTACCCGATCTTCCCTTCAGGCTTGAAACTCTAGATGTCAAAGGTTGTGAATCTCTTCAAACTATACCTAAGCTTCCCTTGTCCCTTGAAACTTTAGATGTGAGAGGATGTGAATCTCTTCAAAAGCTACAAAACCTTCCCTTGTCCCTTGAAACTCTAGATGTCACAGGTTGTGAATCTCTTCAAACTTTAATGGAGTTTCCCCAATCTCTTAAAGCTCTACAAGCCACAAAATGTGAATCTCTTCAAACTTTACCAAAGCTTCCCCAATCACTTAAAACTTTAGATGTTAATGGTTGCAAATCTCTTCAATCTTTACCAGAGCTTCCCTTATCCCTTGAAACTTTAGATGTTAGAAGTTGTGATTCTCTTCTAACTCTACCAAAGCTTCCTCTTTCACTTCAAAACCTGGACATCAGAGGTTGCGAATCTCTTCAAACTCTACCAAAGCTTCCCATATCCCTTGAATCTTTAGATTTCAGAGCATGTGAATCTCTTCAAACTCTACCAGAACTTCCCTTGTCCCTTGAAAATCTAGATGTTCGAGGTTGTGAATCGCTTCAAACTCTACCAAAGCTTCCATTTTCATTGAAAATTCTAGAAGCCACAGAATGTGAATCTTTTCAAACTCTACCGGAGTTGCCTCCATTCCTCAAAATTTTAGATGTAAATGGTTGCAAGTCTCTTCAATTTTTACCACATCTTCCCCTATCCCTTGAAACTCTAGATATTAGAGGTTGTAAATCTCTTCAAACTATACTACAGCTTCCCTTGTCCCTTGAAACTCTAGATACAGAATTATGCACTTCACTTCTAACTTTTCCAAAGCTTCCCCCTTCCCTTAAAACTCTAGAAGCTACAATTTGTGAATCCCTTCAAACTTTACCAGAGCTTCCTTGGTCCCTTCAAACTCTTAATGTCCAGTATTGTTCTTCACTTCAAAATTTACCAGAGCTTCCCCTATCACTTAAAGCACTAAATGTTTCATGTTGCCAATCATTGGAGAGTCTACCGAAGCTTCCACTATCCCTTGAAACTCTAGATGTCAATGGTTGCATTTCAATTCAAACTTTACCAAAGCTTCCTCTATCCCTTAAAGCTCTAAATGCTAAAGATTGTGAATCATTGAAGACCGTATTGTTTCCTTCAACAATAGTTGAACAATTAAAGGAAAATAAGAAATGGCTTCTGTTCTGGAATTGCTTCAACTTGGATGAACATTCTCTACTTGCTATTGGGTTGAATGCACAGATCAACCTTATGAAATTTGCAAATCACCACCTATCTTCGCCAAATCATGATGATGTTGAAAATTACAGTGATTATGATGATAAATATGGTTCTTATCAAGCTGGTTACATTTATCCAGGAAGCAGTATCGTAGAGTGGATGGAGAATAAGACAACAAAGGATTATTTAATTATTGACCTGTCTTCTCTTGCATTTTCCTCCAAGTTGGGCTTTATTTTCTGCTTCATCCTTGATAAGTGTCAAGACACAGAAATGTTTGGAAAACTTGAAGTTAACCTCATTATAAGTGATGGTGATGGAGAGGGTCAAAAGGGCAGTGTTGGAATGTGCATAGATATTGGTTCCTGGACAATTGAATCAGATCATGTGTGTGTGATATACGACCAAAGATGTTCTAACATGCTAAATAGGAGAGCTAAAACTCAAACAAGGTTTAAAATCCAGGTTAAAGTGGGGGTTCAAACCAGTTACACAGCAACTGGCATACTGTCCAATCTTGCTTTGAAAGGATTTGGGGTGAGCCCTATAAGCATCTCAGCCTATAAAAGTTTCATTCAACAAATGGAATTGCATGACTCAATGTTTCAATTTCATCAAACAAATTGA 5406 0.3666 MLYFFVSCLFLCVMLYFVLWIFKRQKPVEEKLTLDNIAPQIKYDVFVSFRGEDIRDGFLSHLIMDFERKKINAFVDDKLERGDEVWPSLVGAIKGSSMSLIIFSQDYASSRWCLEELVTILECRDKYGQILVPVFYKVEPTDVRYQSSKSYQNAFARHQRKYETNKVQIWRDSLNKSATISGIASSKYPVDAELVKEIAKVVLRKLAKPSVNFRRLVGIDEKVATVESLIGKKPEDTRLVGIWGMGGMGKTTLVEEVFNKLKFKYDATYFLANERDQSNKHGIIPLKKSIFSKLLGYEVDIDTPNSLPEDIVRRIGCMKVLIVLDDVNDLEHQEKLLGSLDNFGSGSRIIVTTRNRQVLKANKFDEEYQLRKFSFDEALELFNLNVFNQSDHQREYNELSERVVNYAQGVPLVVKVLAGRLRGNEKEVWESELDRLKTMPLREVYDVLKWSYNDLDRKEQQVFLDLACFFLRLRKSVNVGSLKSLLKDRESDNSVVVDLKRLEDRALITISKDHSLHEMALKVIQCESSEDNVVFMHDSVQEMAWEIVRRESSRPGSRSRLWDADDIYEALKNNKGNEVIRSLRIQLSAIKKLKLSPQIFANMSILQFLEISGNCNDDLFHQHYILAEGLQLLATELKFLYWESYPLKSLPENFSTERLVILSLQQGSVEKLWDGVKNLVNLRELDLNSSSKLKEIPDLSKATNLEVLDLMCCSMLKALPSSFAHQSKLRILDISYCNKLQTIPELPLLLKTLDVNSCNSLQTLPEFPMSLETLDVRSCNSLQTLPELPLSLETLDIELCTSLETLPKLPSSLKTLKATKCESLQILPKLPLTLKTLEATQCESLQTLPELPQFLETLDVNGCKFLQTLPKLPMTLKNLDVGDCESLQTIPNLPLSLESLDFKGCESLQALPKFPQFLKILNINGCKSLQTLPEFPLYLETLDVRGCESLQTLPKFPMCLKSLDVSGCISLQTLPELPLSLESLDVRGCECLQVLPKLSQSLETLDVSGCESLLTLPDLQLSPKSLDVKDFEPLPTLPELPLSLETLEVRGCEYVQAIVELPLIVETLDTKLCISLKNAKFLPSSLKTLQVTNCESIQTLPKLPHSLIALNTQYCSLLQTLPELPQSLKTLNVTCCQSLISLPELPLCLETLEVTKCESFQNFPKLPRFLKTLDVNGCISLETLPDLPFRLETLDVKGCESLQTIPKLPLSLETLDVRGCESLQKLQNLPLSLETLDVTGCESLQTLMEFPQSLKALQATKCESLQTLPKLPQSLKTLDVNGCKSLQSLPELPLSLETLDVRSCDSLLTLPKLPLSLQNLDIRGCESLQTLPKLPISLESLDFRACESLQTLPELPLSLENLDVRGCESLQTLPKLPFSLKILEATECESFQTLPELPPFLKILDVNGCKSLQFLPHLPLSLETLDIRGCKSLQTILQLPLSLETLDTELCTSLLTFPKLPPSLKTLEATICESLQTLPELPWSLQTLNVQYCSSLQNLPELPLSLKALNVSCCQSLESLPKLPLSLETLDVNGCISIQTLPKLPLSLKALNAKDCESLKTVLFPSTIVEQLKENKKWLLFWNCFNLDEHSLLAIGLNAQINLMKFANHHLSSPNHDDVENYSDYDDKYGSYQAGYIYPGSSIVEWMENKTTKDYLIIDLSSLAFSSKLGFIFCFILDKCQDTEMFGKLEVNLIISDGDGEGQKGSVGMCIDIGSWTIESDHVCVIYDQRCSNMLNRRAKTQTRFKIQVKVGVQTSYTATGILSNLALKGFGVSPISISAYKSFIQQMELHDSMFQFHQTN* 1802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00483 1801 SUPERFAMILY "Winged helix" DNA-binding domain 443 572 IPR036390 -
Lapu9g00483 1801 ProSiteProfiles Leucine-rich repeat profile. 728 750 IPR001611 GO:0005515
Lapu9g00483 1801 Gene3D Ribonuclease Inhibitor 877 1063 IPR032675 -
Lapu9g00483 1801 Gene3D Ribonuclease Inhibitor 1399 1578 IPR032675 -
Lapu9g00483 1801 ProSiteProfiles TIR domain profile. 41 206 IPR000157 GO:0007165
Lapu9g00483 1801 Gene3D - 204 367 IPR027417 -
Lapu9g00483 1801 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 466 IPR027417 -
Lapu9g00483 1801 Gene3D Ribonuclease Inhibitor 1066 1210 IPR032675 -
Lapu9g00483 1801 SUPERFAMILY L domain-like 587 934 - -
Lapu9g00483 1801 Gene3D Ribonuclease Inhibitor 563 770 IPR032675 -
Lapu9g00483 1801 Gene3D Ribonuclease Inhibitor 771 876 IPR032675 -
Lapu9g00483 1801 Gene3D Ribonuclease Inhibitor 1296 1387 IPR032675 -
Lapu9g00483 1801 Gene3D Ribonuclease Inhibitor 1211 1295 IPR032675 -
Lapu9g00483 1801 Pfam TIR domain 42 207 IPR000157 GO:0007165
Lapu9g00483 1801 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 43 921 IPR044974 GO:0006952
Lapu9g00483 1801 PRINTS Disease resistance protein signature 407 421 - -
Lapu9g00483 1801 PRINTS Disease resistance protein signature 239 254 - -
Lapu9g00483 1801 PRINTS Disease resistance protein signature 677 693 - -
Lapu9g00483 1801 PRINTS Disease resistance protein signature 314 328 - -
Lapu9g00483 1801 FunFam Disease resistance protein (TIR-NBS-LRR class) 39 208 - -
Lapu9g00483 1801 Gene3D - 373 456 IPR042197 -
Lapu9g00483 1801 Gene3D - 40 203 IPR035897 -
Lapu9g00483 1801 SUPERFAMILY Toll/Interleukin receptor TIR domain 39 182 IPR035897 -
Lapu9g00483 1801 SMART LRR_bac_2 1230 1250 - -
Lapu9g00483 1801 SMART LRR_bac_2 1398 1418 - -
Lapu9g00483 1801 SMART LRR_bac_2 1335 1355 - -
Lapu9g00483 1801 SMART LRR_bac_2 1503 1523 - -
Lapu9g00483 1801 SMART LRR_bac_2 831 851 - -
Lapu9g00483 1801 SMART LRR_bac_2 1524 1544 - -
Lapu9g00483 1801 SMART LRR_bac_2 1314 1334 - -
Lapu9g00483 1801 SMART LRR_bac_2 957 977 - -
Lapu9g00483 1801 SMART LRR_bac_2 852 872 - -
Lapu9g00483 1801 SMART LRR_bac_2 1482 1502 - -
Lapu9g00483 1801 SMART LRR_bac_2 1167 1187 - -
Lapu9g00483 1801 SMART LRR_bac_2 726 746 - -
Lapu9g00483 1801 SMART LRR_bac_2 999 1019 - -
Lapu9g00483 1801 SMART LRR_bac_2 1293 1313 - -
Lapu9g00483 1801 SMART LRR_bac_2 1272 1292 - -
Lapu9g00483 1801 SMART LRR_bac_2 978 998 - -
Lapu9g00483 1801 SMART LRR_bac_2 1125 1145 - -
Lapu9g00483 1801 SMART LRR_bac_2 768 788 - -
Lapu9g00483 1801 SMART LRR_bac_2 1083 1103 - -
Lapu9g00483 1801 SMART LRR_bac_2 747 767 - -
Lapu9g00483 1801 SMART LRR_bac_2 789 809 - -
Lapu9g00483 1801 SMART LRR_bac_2 1188 1208 - -
Lapu9g00483 1801 SMART LRR_bac_2 915 935 - -
Lapu9g00483 1801 SMART LRR_bac_2 1356 1376 - -
Lapu9g00483 1801 SMART LRR_bac_2 1251 1271 - -
Lapu9g00483 1801 SMART LRR_bac_2 1377 1397 - -
Lapu9g00483 1801 SMART LRR_bac_2 936 956 - -
Lapu9g00483 1801 SMART LRR_bac_2 810 830 - -
Lapu9g00483 1801 SMART LRR_bac_2 1461 1481 - -
Lapu9g00483 1801 SMART LRR_bac_2 873 893 - -
Lapu9g00483 1801 SMART LRR_bac_2 1104 1124 - -
Lapu9g00483 1801 Pfam NB-ARC domain 228 452 IPR002182 GO:0043531
Lapu9g00483 1801 SMART till_3 42 180 IPR000157 GO:0007165
Lapu9g00483 1801 SUPERFAMILY L domain-like 1126 1504 - -
Lapu9g00483 1801 SUPERFAMILY L domain-like 874 1164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00483 Lapu-Chr9 5366537 5375413 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00483 783 976 WRKY Transcription Factor Family AT4G12020 31.390 8.69e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00483 - - vun:114164115 2986.82