Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00466 ATGGAGAATATTGGTGACGAGTACAAGCATTACTGGGAGACCACCATGTTCCTCCAGACCCAAGAACTTGACAGTTGGGGGTTGGATGAGGCTCTATCAGGGTACTACGATTCGAGTTCCCCCGATGGTGCTGCTTCATCTGCAGCATCTAAGAACATTGTTTCCGAGAGGAATCGGAGAAAGAAGCTCAATGAAAGGCTTTTCGCGCTTAGATCGGTGGTTCCTAATATCAGCAAGATGGACAAGGCTTCCATTATTAAGGATGCTATTGAGTACATCCAGCATTTGCACGAGCAAGAGAAGATGATCCAAGCTGAGATAATGGATCTTGAATCTGGGATGCCAAAAAAGAGTAGTTCAAGCTATGACTTTGAGCAGGAACAGCTTCCTGTGGTGCTGAGGTCCAAGAAGAAGAGAACGGAGCAGATATACGATTCAGTCATTTCAAGAAACTCCCCAATTGAAGTCCTTGAGCTGAGTGTTGTACACATGGGGGAGAAAATTGTTGTGGTGAGTTTGACATGCAGCAAAAGGACAGACACAATGGTGAAACTGTGCGAGGTGTTCGAATCTTTGAAGCTCAAGATCATCACTGCTAACATCACTTCGGTTTCAGGGAGGCTTTTGAAGACAGTCTTCATCGAGGCTAACAAAGAAGAGAAAGATGATTTGGAGATAAAGATTCAGAGAGCAATTGCAGCTCTTAACGACCCTCTAAGTCCCATGAGCATTTAA 735 0.4463 MENIGDEYKHYWETTMFLQTQELDSWGLDEALSGYYDSSSPDGAASSAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIEYIQHLHEQEKMIQAEIMDLESGMPKKSSSSYDFEQEQLPVVLRSKKKRTEQIYDSVISRNSPIEVLELSVVHMGEKIVVVSLTCSKRTDTMVKLCEVFESLKLKIITANITSVSGRLLKTVFIEANKEEKDDLEIKIQRAIAALNDPLSPMSI* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00466 244 Gene3D - 44 112 IPR036638 GO:0046983
Lapu9g00466 244 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 46 227 - -
Lapu9g00466 244 Coils Coil 214 234 - -
Lapu9g00466 244 SMART finulus 53 102 IPR011598 GO:0046983
Lapu9g00466 244 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 112 IPR036638 GO:0046983
Lapu9g00466 244 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 96 IPR011598 GO:0046983
Lapu9g00466 244 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 43 116 - -
Lapu9g00466 244 Pfam Helix-loop-helix DNA-binding domain 54 97 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00466 Lapu-Chr9 5104112 5109883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00466 1 215 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 63.927 3.22e-85 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu9g00466 HLH 2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00466 - - vun:114163278 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00466 9 5104112 5109883 Lapu9g00466 9 5104112 5109883 ECH