Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00452 ATGGCAGTGGATATGATGGATCTTGTTCCCAGAACCAGGATGGAGGAACAGATAGCAATACAAGAAGCTGCTTCCGCTGGTTTGAAAAGCATGGAACATCTCATTCGACTCCTTTCTCCCTCGGCTTGCAATTCTTCCTCTTCTTCTTCTTCTAACAACAACGTTAATCTCAACAACCTCGACTGCTCCGAAATCACCGACTTCACCGTCTCCAAGTTCAAACAGGTCATTAACCTTCTCAACCGCACCGGCCACGCCCGTTTCCGCCGTGCACCGCCTCAAGCCCAGCCCCAGGCCCAACCGCAACCGCAGCCTCAAACCCAACAAGGCTTTACTTTAGATTTCGTTAAACCCACCATTCTCAACTCTAAGCCCTGCAACAAAGACGAAACTCTCACTCTCTCCACCACCACAACCACCTCCTCTTCCTTTTTATCCTCCGTCACCAACGACGCCAGCGTCTCCGACGGCAAGATCGGCCCTTTCCTCCCTCCTCCCTCCGCCGCCAAACCCCCTCTCTCCAGCTCTCACCGGAAAAAGTGCCGCGACGCTGCCCTCTCAGCCAAACCCTCCTGCCACTGCTCCAAGAAAAGGAAATCACGCGTGAAACGAACGATCCGCGTCCCGGCGATAAGTACTAAGATCGCCGACATCCCGCCGGACGAGTACTCGTGGAGAAAGTACGGACAAAAACCGATCAAGGGTTCACCTTTTCCTCGTGGGTACTACAAGTGCAGCACCGTGAGAGGGTGTCCGGCGAGAAAGCACGTGGAGCGCGCGCAAGATGACCCCAAGATGCTGATAGTGACGTACGAGGGTGAGCACCGTCACGCGCTTCCCTTACCGGCCGGTACCGGCGTTGGTTTGGGCCTTTGA 876 0.5502 MAVDMMDLVPRTRMEEQIAIQEAASAGLKSMEHLIRLLSPSACNSSSSSSSNNNVNLNNLDCSEITDFTVSKFKQVINLLNRTGHARFRRAPPQAQPQAQPQPQPQTQQGFTLDFVKPTILNSKPCNKDETLTLSTTTTTSSSFLSSVTNDASVSDGKIGPFLPPPSAAKPPLSSSHRKKCRDAALSAKPSCHCSKKRKSRVKRTIRVPAISTKIADIPPDEYSWRKYGQKPIKGSPFPRGYYKCSTVRGCPARKHVERAQDDPKMLIVTYEGEHRHALPLPAGTGVGLGL* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00452 291 ProSiteProfiles WRKY domain profile. 214 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g00452 291 SMART WRKY_cls 219 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g00452 291 MobiDBLite consensus disorder prediction 89 109 - -
Lapu9g00452 291 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 279 IPR044810 GO:0003700
Lapu9g00452 291 FunFam WRKY transcription factor 65 203 280 - -
Lapu9g00452 291 Gene3D WRKY domain 205 281 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g00452 291 SUPERFAMILY WRKY DNA-binding domain 217 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g00452 291 Pfam WRKY DNA -binding domain 221 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g00452 291 Pfam Plant zinc cluster domain 178 217 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00452 Lapu-Chr9 4860171 4862257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00452 1 277 WRKY Transcription Factor Family AT2G24570 52.366 2.02e-95 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu9g00452 WRKY 2.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00452 - - gmx:100127391 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00452 9 4860171 4862257 Lapu9g00452 9 4860171 4862257 ECH
Lapu3g00559 3 5677243 5678956 Lapu9g00452 9 4860171 4862257 PCT