Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00440 ATGATTCTGCAGCTGTTGAAGCTCTGCGTCATTGGCTTTGTTGTGGCATTCCAAGGATCTCAAGGGTCTATTATATCCCCATCTCCAGCATTCCTTCCAGTCATTCAACCTAGTGGAGAAGCACCTGCTCCTATCCACATTGGACTGCCATGGGGAAGTCCACCAAGATCACCTTCAGGTGCAAATGGGTTTGTTACATCCCCATCTCCAGAAACCATACACGTGGATCCTTCCCCCAGTGAAGCTCCTGGTCTTGTACACCCAAAAGAACCATGGAGAACCATTGCACCAAGCCCTCAAGAAGTACCAAATGGGTCATTCTTGTCCCCTCCTACATTACCACCTCCTAAATCTGCTCCAACTCCTGAGAAGATAAAAGAATCTGAACCATCCATATCTCCTAGTCCTGGTGCAAGCACCATAACATCATCAGCACCGCCATATAATGCTGCTCCTGGACCATCAACTGCAGAAGGGGAGGTTTCACCATCCATACAACTAAGTCCACCTCAAAGCAGAACACCTGCTGTTAGTCCTCCTGTTTCCACACCAATTGCTCCAGCTCCCATTGCAATATCTTCAGGAAATTTGACAAAAACTTCACCAGTTAGCCAACCAATTGACCATGGAAGTTTGGCTCCTAAGATTGATGAGAGGAATAAGAGTCACAAGCCTGAGCCAGCTTTTCCAGCCGTAGTTCCAATACCTTCTACAGAGTTGCCCAAATATTCACCAGTAAGCCAACCAAATGAAAATGGAAGTTTGCCTCATAGAGAGGGTGCAAATAATGGTCACATCCCTGAGCTAATTTCACCAGCCCCTTTAGTGTTCAGTTTGCCTGAACATCCGCCAGCGAGTCAGCCAACTGAACATGGAAGTTCGCCTCCTACTCTTCCCAGAGGGGATATCAACAACGGTCACACATTGGAGCCAGTTTCACAAGCACCAGCTGCAACACCTACAAATTCGCCAAAAAATTCACCAGTCAGTCAACAAACTCATGGAAATTCCCCACCTGATCTTCACAATGGAACTGCAAATAATGGTCACACTCATACTGCAGCCCCAAAAATGTCACCATCAGTCACGCCACCAAGTCCATTTCCAGTAGATCCACCATTGGTCCACCCAGTCATACCAGCAGCAGCTCCATCCAAATCACCAGCACCTATTGTCTCTCCTGCATTGACTCCTTCCAGAAGCTTTAATTGGAAGAAAGGTGGAGAACCAGTTTCTGCACCTGTGTACAAAACGCCAAAGCCACTACCGGCTATAGTACATCCCCATACTCAAGCACCTGTTGTCTCTCCTGCATTAACACCTTCTAGAAACTTCAATTGGAAAAAAGGTGGAGAACCAGTTTCTGCTCCTCCGTACAAAACACCGAAGCCACTACCGGCTATAGTACATTCCCCTGCTCAAGCTCCTCCTCCTGCACCTGAAGCAAGGCAATTTCACCATGCTCCTGAGCCATCTCCTAACAAAGATCATCCTCCTGCATCTTCGCCTTCAACCACATTTTATAAGCATCACCACACAAGGAACACAATCAGCAGCCCTGCTCCTGCATCATCATATTCAGTTTCTCCTTCCACTTCAAAACACCAAGATGAACCAATTCCTCCATCTCTGCTGCCAGCAAGTAGGCAAAGACATCATGCTCCAACACCATTAAACACAGATTCCACAGTTTCCCCGTTTGCCTTCCCTATTCAGTCACCAGTAAGCCAAATTTCACCAGCTCCTTCTCCATCATTCAAAATACCCCCCCACTCAACCAAAATTCCATTTCATCCTCCTAAAGTATCTCCTTTCCGGCCTTCTTCCAAGAGCCCTAAGAAGCCAGTCCTACCTCGTAGTCAAGCACTGCCACCCCCACCTCCGAATGAAGATTGTATATCACTGGTTTGCTCGGATCCCTATACAAGTACTCCACCTGGAGCACCTTGCACATGTGTGTTGCCCATGAAAGTCGGTCTTCGCCTTAGTGTTTCTCTGTATACTTTCTTCCCTTTGGTTTCAGAGTTTGCTTCTGAAATTGCCAGTGGGGTTTTCATGAAGCAAAGTCAAGTTCGCATTATGGGAGCTGACGCAGCAAACCTGCAACCTGATAAAACTATTGTATTCATTGATTTGGTACCACTAGGGGAAAAATTTGATAACACTACAGCCTTTTTAACTTCTGCGAGATTTTGGCATAAACAGGTAGCTATAAAGACTTCTTACTTCGGTGATTATGACGTATTATATGTGAGCTATACAGGTTTGCCTCCATCTCCTCCTTTACCTCCTTCAAGCATTACAATTGTTGATGGTGGTCCATATTCGGGTGGTGGCAATAACAGTAGGACCATAAAGCCCCTTGGGGTTGACATATCAAAGAGGCAGCATAAAGGCGGACTTAGCAAGGGCATGATTGCTATTATTTCTCTCTCAGTTTTTCTAGTAATTGTTTTATGCTTTGCTGCTGCTTGGGCCTTGTTCAAGTTCAGAGATCATGCAAGTAAACCCGCATCAACCCCACGTGTTCTACCTCCTTCTCTTACCAAAGCACCAGGTGCTGTTGGATCAATAGTTGGAGGGGGGCTTGCTTCAGCTTCAACATCGTTCCGGTCTAGCATTGCTGCTTATGCAGGATCTGCTAAGAATTTTAGCATGAATGACATTGAGAAAGCCACAGATAATTTCCACGCCTCTAGAGTACTTGGAGAAGGTGGTTTTGGGCGTGTTTATAGTGGTGTACTTGAAGATGGGACAAAAGTGGCAGTCAAGGTTCTGAAAAGGGAGGATCATCATGGTGATCGTGAATTCCTATCTGAAGTAGAGATGCTTAGCCGCCTTCATCATAGAAACTTGGTTAAATTGATTGGTATATGCACAGAGGTCAGCTTCCGATGCCTGGTTTATGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTACATGGGATGGACAAGGAAAACAGTCCACTTGATTGGAGTGCCCGGATAAAGATAGCACTTGGCGCTGCTCGTGGACTGGCTTATCTGCATGAAGATTCAAGTCCTCATGTCATACATAGGGACTTCAAGTCTAGTAATATCTTGCTGGAAGATGATTTTACACCAAAAGTATCCGATTTTGGTTTAGCCCGAACAGCAGCTGATGAGGAGAACAGGCACATATCCACACGTGTAATGGGAACTTTCGGTTATGTGGCTCCCGAGTATGCAATGACTGGGCATCTTCTTGTGAAGAGTGATGTTTACAGCTATGGTGTTGTCCTCCTTGAGCTTTTGACTGGAAGAAAACCAGTAGACATGTCACGATCGCCTGGTCAAGAGAATCTGGTTGCTTGGGCTCGCCCATTGCTCTCGAGCGAAGAAGGAGTGCAAGCAATAATAGATCCATCTTTGGGAGCTGATGTGCCTTCTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTACAACCAGAGGTTTCAGACCGTCCCTTTATGGGTGAGGTTGTTCAGGCTCTAAAACTAGTGTGCAATGAATGTGATGAGGCAAGAGAAACAGGCTCAAGTTCTACCTCTGTTGATTTGAGTCATTCTAGACAAGTATCAGATAATTTTCAAGGCCAATCCTCAGCCACCAATTATGATTCTGGAGTTGATATTGAAAATGGGTTGTTAGCATCAGAGTTGTTCAGCTCATCATCCGCTAGATATGGAAGGCCCGTATCAGGATCATTTAGAAGACATTCTTATTCAGGTCCTCTGAGTACTGGAAGAAGCAAACGATTATGGCAGATAATTAGAAAGCTTTCTGGTGGTAGTGTCAGTGAACATGGAACTATGTTCAAGTTGTGA 3840 0.4549 MILQLLKLCVIGFVVAFQGSQGSIISPSPAFLPVIQPSGEAPAPIHIGLPWGSPPRSPSGANGFVTSPSPETIHVDPSPSEAPGLVHPKEPWRTIAPSPQEVPNGSFLSPPTLPPPKSAPTPEKIKESEPSISPSPGASTITSSAPPYNAAPGPSTAEGEVSPSIQLSPPQSRTPAVSPPVSTPIAPAPIAISSGNLTKTSPVSQPIDHGSLAPKIDERNKSHKPEPAFPAVVPIPSTELPKYSPVSQPNENGSLPHREGANNGHIPELISPAPLVFSLPEHPPASQPTEHGSSPPTLPRGDINNGHTLEPVSQAPAATPTNSPKNSPVSQQTHGNSPPDLHNGTANNGHTHTAAPKMSPSVTPPSPFPVDPPLVHPVIPAAAPSKSPAPIVSPALTPSRSFNWKKGGEPVSAPVYKTPKPLPAIVHPHTQAPVVSPALTPSRNFNWKKGGEPVSAPPYKTPKPLPAIVHSPAQAPPPAPEARQFHHAPEPSPNKDHPPASSPSTTFYKHHHTRNTISSPAPASSYSVSPSTSKHQDEPIPPSLLPASRQRHHAPTPLNTDSTVSPFAFPIQSPVSQISPAPSPSFKIPPHSTKIPFHPPKVSPFRPSSKSPKKPVLPRSQALPPPPPNEDCISLVCSDPYTSTPPGAPCTCVLPMKVGLRLSVSLYTFFPLVSEFASEIASGVFMKQSQVRIMGADAANLQPDKTIVFIDLVPLGEKFDNTTAFLTSARFWHKQVAIKTSYFGDYDVLYVSYTGLPPSPPLPPSSITIVDGGPYSGGGNNSRTIKPLGVDISKRQHKGGLSKGMIAIISLSVFLVIVLCFAAAWALFKFRDHASKPASTPRVLPPSLTKAPGAVGSIVGGGLASASTSFRSSIAAYAGSAKNFSMNDIEKATDNFHASRVLGEGGFGRVYSGVLEDGTKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICTEVSFRCLVYELIPNGSVESHLHGMDKENSPLDWSARIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLEDDFTPKVSDFGLARTAADEENRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSRSPGQENLVAWARPLLSSEEGVQAIIDPSLGADVPSDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEARETGSSSTSVDLSHSRQVSDNFQGQSSATNYDSGVDIENGLLASELFSSSSARYGRPVSGSFRRHSYSGPLSTGRSKRLWQIIRKLSGGSVSEHGTMFKL* 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00440 1279 MobiDBLite consensus disorder prediction 193 207 - -
Lapu9g00440 1279 MobiDBLite consensus disorder prediction 360 379 - -
Lapu9g00440 1279 MobiDBLite consensus disorder prediction 1182 1209 - -
Lapu9g00440 1279 MobiDBLite consensus disorder prediction 553 582 - -
Lapu9g00440 1279 MobiDBLite consensus disorder prediction 287 359 - -
Lapu9g00440 1279 MobiDBLite consensus disorder prediction 59 74 - -
Lapu9g00440 1279 ProSitePatterns Protein kinases ATP-binding region signature. 902 924 IPR017441 GO:0005524
Lapu9g00440 1279 MobiDBLite consensus disorder prediction 433 627 - -
Lapu9g00440 1279 MobiDBLite consensus disorder prediction 132 150 - -
Lapu9g00440 1279 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1018 1030 IPR008271 GO:0004672|GO:0006468
Lapu9g00440 1279 Gene3D Phosphorylase Kinase; domain 1 868 971 - -
Lapu9g00440 1279 FunFam Receptor-like serine/threonine-protein kinase ALE2 972 1189 - -
Lapu9g00440 1279 PANTHER OS01G0750732 PROTEIN 624 1196 - -
Lapu9g00440 1279 MobiDBLite consensus disorder prediction 583 606 - -
Lapu9g00440 1279 FunFam receptor-like serine/threonine-protein kinase ALE2 869 971 - -
Lapu9g00440 1279 Pfam Protein tyrosine and serine/threonine kinase 898 1169 IPR001245 GO:0004672|GO:0006468
Lapu9g00440 1279 MobiDBLite consensus disorder prediction 457 484 - -
Lapu9g00440 1279 Gene3D Transferase(Phosphotransferase) domain 1 972 1195 - -
Lapu9g00440 1279 MobiDBLite consensus disorder prediction 499 538 - -
Lapu9g00440 1279 MobiDBLite consensus disorder prediction 53 407 - -
Lapu9g00440 1279 MobiDBLite consensus disorder prediction 241 257 - -
Lapu9g00440 1279 CDD STKc_IRAK 902 1170 - -
Lapu9g00440 1279 SUPERFAMILY Protein kinase-like (PK-like) 877 1169 IPR011009 -
Lapu9g00440 1279 ProSiteProfiles Protein kinase domain profile. 896 1172 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00440 Lapu-Chr9 4705225 4716518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00440 358 1275 Receptor kinase-like Gene Family AT5G56890 55.765 0.0 878
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lapu9g00440 PK_Tyr_Ser-Thr 8.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00440 - - gmx:100802309 2028.45