Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00417 ATGGAGAATCACAAGATGGTACAATCGGTGCATGTTAAGGAGGAGGAAGATAATAACACGGCGGTGCGGGAAGAGGAGGATCAAGCAGGCGTGGGCTCCAGCTTGACCTTGGAGAGGGTCGCTGCAGCTAAGAAATTCATTGAGGACCATTACAAGTCTCAGATGAAACTCATCCAAGAACGTAAAGAGAGGCGTTTAGTGCTAGAAAAGAAGTTAGCATCTTCTCATGTACCAGAAGAGGAACAGATCAATCAATTGAAGGATTTAGAGAGCAAGGAAACTGAGTATATGCGGTTAAAAAGACATAAAATATGTGTTGATGATTTTGACCTTCTAGCCATTATTGGCAGGGGAGCCTTTGGGGAGGTAACACTCTGTCGGGAAAAGATATCAGGTAATATATATGCGATGAAAAAGTTGAAAAAGTCTGAAATGCTCAGCAGGGGACAGGTTGAGCACGTTAGAGCTGAAAGGAATGTACTTGCAGAAGTGGCCAGTGACTGCATCGTAAAACTCTATTACTCTTTTCAAGATGATGAACACTTATATCTAATAATGGAGTATTTGCCCGGTGGTGATATAATGACTTTGTTGATGAGGGAAGAAACTTTGACTGAAACTGTGGCTAGATTTTACATTGCCCAAAGTGTTTTGGCCATAGAGTCTATTCATAAACATAACTACATTCACAGAGATATAAAACCTGACAACCTTCTATTGGACAAAAATGGTCACATGAAGCTATCTGATTTTGGTCTTTGCAAGCCACTTGACTGCTCAAGTTTATCATCTATTCATGAAATGGAGATCCTCGATGATGGGAACTTATATGATACCATGGATGTTGATGGAGCCTTGCCAAATGGCAGAAATGGTAGGCGCTGGAAAAGTCCGTTGGAACAACTTCAACATTGGCAGATTAATAGGAGAAAACTGGCATTTTCCACTGTTGGAACTCCAGACTATATTGCCCCTGAAGTATTACTGAAAAAGGGCTACAGTGTGGAGTGTGACTGGTGGTCTCTCGGTGCTATAATGTATGAAATGTTAGTCGGATATCCTCCATTTTACTCTGATGATCCTGTAACAACATGCAGAAAGATCGTGCACTGGAAAAATCACTTGAAATTTCCAGTGGAGGCCAGATTGACACCACAAGCCAAGGATCTAATATGCAGGTTGCTTTGTGGTGTTTCACAAAGGCTTGGCACCGGAGGAGCAGAAGAAATTAAAGCTCATCCTTGGTTCAAAGATGTCATATGGGACAGGCTCTATGAAATGGAGGCAGCATTTAAACCACAAGTCTATGGAGAGCTTGACACTCAGAATTTTATGAAATTTGATGAGGTCGAACAGCCCAAAGCAACTAGAGCTGGATCTGGACCCTTCAGAAAGAAGCTCTTAACTTCTCAAGATCTCAATTTTGTTGGTTATACATATAAGAATTTTGCTGCTGTCAAGGGGAAGCGTCAATCTAATGGTAAGTATTGTTTCCCCTGA 1500 0.4153 MENHKMVQSVHVKEEEDNNTAVREEEDQAGVGSSLTLERVAAAKKFIEDHYKSQMKLIQERKERRLVLEKKLASSHVPEEEQINQLKDLESKETEYMRLKRHKICVDDFDLLAIIGRGAFGEVTLCREKISGNIYAMKKLKKSEMLSRGQVEHVRAERNVLAEVASDCIVKLYYSFQDDEHLYLIMEYLPGGDIMTLLMREETLTETVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSSLSSIHEMEILDDGNLYDTMDVDGALPNGRNGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYSVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPVEARLTPQAKDLICRLLCGVSQRLGTGGAEEIKAHPWFKDVIWDRLYEMEAAFKPQVYGELDTQNFMKFDEVEQPKATRAGSGPFRKKLLTSQDLNFVGYTYKNFAAVKGKRQSNGKYCFP* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00417 499 ProSiteProfiles Protein kinase domain profile. 109 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00417 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Lapu9g00417 499 SMART serkin_6 109 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00417 499 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Lapu9g00417 499 CDD STKc_NDR_like 107 481 - -
Lapu9g00417 499 PANTHER SERINE/THREONINE-PROTEIN KINASE 12 451 - -
Lapu9g00417 499 FunFam Non-specific serine/threonine protein kinase 193 260 - -
Lapu9g00417 499 FunFam Non-specific serine/threonine protein kinase 70 192 - -
Lapu9g00417 499 Gene3D Transferase(Phosphotransferase) domain 1 195 433 - -
Lapu9g00417 499 SUPERFAMILY Protein kinase-like (PK-like) 91 459 IPR011009 -
Lapu9g00417 499 CDD MobB_NDR_LATS-like 43 104 - -
Lapu9g00417 499 Pfam Protein kinase domain 112 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00417 499 Pfam Protein kinase domain 309 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00417 499 MobiDBLite consensus disorder prediction 1 19 - -
Lapu9g00417 499 Gene3D Phosphorylase Kinase; domain 1 99 194 - -
Lapu9g00417 499 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 490 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lapu9g00417 499 SMART pkinase_C_6 417 482 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lapu9g00417 499 MobiDBLite consensus disorder prediction 1 32 - -
Lapu9g00417 499 FunFam Non-specific serine/threonine protein kinase 315 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00417 Lapu-Chr9 4412011 4424036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00417 14 492 AGC Kinase Gene Family AT4G33080 74.792 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lapu9g00417 Pkinase 4.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00417 K08790 - gmx:100811359 876.7