Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00403 ATGGAAGAAGAAAGAGGCGTGGTACACAAGAAAGTGACAGAGAACGAGGTTGTTCTACGAATTTCAGACTCTGAAGAAGCCACGAATGCGATGAAGGAAATAAAAGAGTCCGGAAGTTTCCCAGTAGCTGAAAGCAGTTCCCTTTCTTCTCAGCACAATACCCAGATAGGTAGAAGGTTTAGAGATTCTCATGGTGAAATCACAGAGCCTTTGAGAAACAAGGATCAAGTTTCCACAGAGTTGGTGACAAGTACAAAGAGGTTGATGGGTCGGTCGGAATTTTCGAAGCCAAAGTCCAGAATGGTGGAACCACCGTGTCCAAGACATGCCAAATTCGTTGAAGAAAAGTATCGAATGACAAGTTCATTTTCAAGGAATTCTCCTAACAGGAATGTTCCCGAAGCAACTGTAGTCACCCCAAGAACCACCTTGCTTGGGACTCCTGGGGAAGAAGAAGATGATGATGATGAAGAAGAAGTGTACAAGATTGCAAATATTGAAGTGAGCAAGAGATCTGGAAGGAAGTGGAGAGTTGCTGAGTTGTTTGCTTTTGCTTGCATCATGGGGTTTTTTATTGCAAGCTTGATTGTGAATGAGTTGCAAAAAAGAGAGATTTGGGGTTTGGAGCTGTGGAAATGGTGTGTATTTATACTGGTTATCCTCTGTGGTAGACTGGTCACTGAGTGGTTTATCAATGTTTTGGTTTTCTTGATTGAGAGGAACTTCTTGTTTAAGAAGAAGGTTTTGTACTTTGTTTATGGTGTGAAGAAGAGTGTTCAGGGCTTTATACGGCTGAGTTTGGTTCTTTTGACATGGGACATGCTTTTCAGCCCTGGAGTGAAGAGAACCAGTAAGGTTGGTAGGATTCTTAATTACATTGCTTTGACCCTTGCTTCTTGTCTTATTGGAGCATCTTTATGGTTAGCCAAAACATTGTTGATAAAGCTTCTAGCTTCAAAATTTCAATCTACTAGATTTTTTGACAGGGTGCAAGAATCAATCTTTCATCAATACATTCTCAAGACTCTTTCAGGCCCTCCTTTGATGGAGGTGGCTGAAAAGGTAGGTACCACTTCAAATAGTGGCCAACTCTGTTTTAAGAAGATGACTATTAAGAAGGAAGGGGAGAAAGAACAAGTTATTGATCTAGACAAGCTCAAGAAAATGAAGCAAAAGAAAGTTTCTGCTTGGACTATGAAAGGGTTGGTTAATGTGATAAGGAGTTCTGGATTGTCTACCATCTCCTATGCACAGGATGAAGATGAGAATGAACCGAAAGATAATGAAATTAACAGCGAGTGGGAAGCAAAGGCAGCTGCTTATAGAATTTTTAGGAACGTTGCCAAGTCAGGACACAAGTATATTGAGAAGGATGACCTCTTGCGATTCATGAAAATTGAAGAAGTGGCAAATGTGCTTCCACTATTTGAAGGGGCAGTTGAGTCTGGAAGGATTAAGAGGAAGTCTCTCAAGAACTGGCTGTTGAAAGTCTACCTTGGACGCCGATCGCTCATACATTCACTAAATGACACCAACACTGCTGTTGATGACTTGAATATGCTTGCTTCTGCAGTTGTGCTTATTTTGCTCATTGTTGTGTGGCTTCTTTTAATGGGTTTCTTAACAACTAAAGTTCTTGTCTTTATATCATCCCAGCTTTTACTTGTGGTTTTCATGTTTGGCAACACAGCTAAGACTCTATTTGAAGATATTATATTTGTTTTTGTGATGCACCCGTTTGATGTTGGTGACCGCTGCGTCATTGATGGTGTTCAGATGGTTGTGGAAGAGATGAACATACTAACTACCGTCTTTTTGAGATATGACAATGAAAAGATTTTCTATCCAAATTCAGTTCTGGCAACCAAGCCAATCAGTAACTTCAACAGGAGTCCAGAAATGAGTGATTGTGTTGAATTTGCTGTTGATGTTTCTACTTCTATTGAAAGTATTGGAGCTTTAAAGGCAAAGTTAAAAGTATATTTGGAGGGTAGACCTGAACACTGGCATACAAAACACAACGTATTGGTTAAGGACATTGAGGATGTAAACAAGATGAAAATGGTTCTATGTGTTACTCACACCATAAATTTTCAGAACTATGGGGATAAGAACAGCCGAAGATCCGAATTGGTCCTGCAGTTAAAGAAAATTCTTGAAGACCTTAATATTAAATATCATCTGCTGCCACAAGAAGTTCATGTCAGTTATGTAAGGTCACAAGACTCAACATCTCCAGCAGTTTGA 2247 0.3983 MEEERGVVHKKVTENEVVLRISDSEEATNAMKEIKESGSFPVAESSSLSSQHNTQIGRRFRDSHGEITEPLRNKDQVSTELVTSTKRLMGRSEFSKPKSRMVEPPCPRHAKFVEEKYRMTSSFSRNSPNRNVPEATVVTPRTTLLGTPGEEEDDDDEEEVYKIANIEVSKRSGRKWRVAELFAFACIMGFFIASLIVNELQKREIWGLELWKWCVFILVILCGRLVTEWFINVLVFLIERNFLFKKKVLYFVYGVKKSVQGFIRLSLVLLTWDMLFSPGVKRTSKVGRILNYIALTLASCLIGASLWLAKTLLIKLLASKFQSTRFFDRVQESIFHQYILKTLSGPPLMEVAEKVGTTSNSGQLCFKKMTIKKEGEKEQVIDLDKLKKMKQKKVSAWTMKGLVNVIRSSGLSTISYAQDEDENEPKDNEINSEWEAKAAAYRIFRNVAKSGHKYIEKDDLLRFMKIEEVANVLPLFEGAVESGRIKRKSLKNWLLKVYLGRRSLIHSLNDTNTAVDDLNMLASAVVLILLIVVWLLLMGFLTTKVLVFISSQLLLVVFMFGNTAKTLFEDIIFVFVMHPFDVGDRCVIDGVQMVVEEMNILTTVFLRYDNEKIFYPNSVLATKPISNFNRSPEMSDCVEFAVDVSTSIESIGALKAKLKVYLEGRPEHWHTKHNVLVKDIEDVNKMKMVLCVTHTINFQNYGDKNSRRSELVLQLKKILEDLNIKYHLLPQEVHVSYVRSQDSTSPAV* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00403 748 Gene3D - 579 628 IPR023408 -
Lapu9g00403 748 PIRSF Memb_At2g17000 2 747 IPR016688 -
Lapu9g00403 748 SUPERFAMILY Sm-like ribonucleoproteins 571 628 IPR010920 -
Lapu9g00403 748 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 10 738 IPR016688 -
Lapu9g00403 748 FunFam Predicted mechanosensitive ion channel 579 628 - -
Lapu9g00403 748 Pfam Mechanosensitive ion channel 522 725 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00403 Lapu-Chr9 4268253 4271674 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00403 65 736 Mechanosensitive Ion Channel Family AT5G12080 50.073 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00403 K22048 - gmx:100777332 1112.83